C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: pyrroline-5-carboxylate reductase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000026133 Pycr1-001 ENSMUSG00000025140 10090 - 11:120639416-120643748 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000026133
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000026133 5.120±2.20 0.789±0.23 7.166±0.88 5.072±4.01 3.186±0.44 9.500±1.68 1.130±0.27 0.265±0.06 2.275±2.11 1.862±0.41 1.778±0.17 3.727±1.79 2.419±1.85 0.297±0.19

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006IG CIL_0006IG_0002 CGP 11:120625117-120643769
CIL_0004VN CIL_0004VN_0002 CGP 11:120635712-120648158

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004735 IEA:ISS pyrroline-5-carboxylate reductase activity
GO:0005739 IDA:ISS mitochondrion
GO:0006561 IEA:ISS proline biosynthetic process
GO:0034599 ISS cellular response to oxidative stress
GO:0055114 IEA oxidation-reduction process
GO:0055129 IEA L-proline biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000329875 PYCR1-001 protein_coding Homo_sapiens 0 1031
ENST00000337943 PYCR1-002 protein_coding Homo_sapiens 0 974
ENST00000402252 PYCR1-003 protein_coding Homo_sapiens 0 1031
ENST00000403172 PYCR1-005 protein_coding Homo_sapiens 0 582
ENST00000405481 PYCR1-011 protein_coding Homo_sapiens 0 867
ENST00000577756 PYCR1-015 protein_coding Homo_sapiens 0 710
ENST00000579366 PYCR1-007 protein_coding Homo_sapiens 0 385
ENST00000579698 PYCR1-012 protein_coding Homo_sapiens 0 527
ENST00000581271 PYCR1-008 protein_coding Homo_sapiens 0 387
ENST00000582198 PYCR1-006 protein_coding Homo_sapiens 0 883
ENST00000583564 PYCR1-014 protein_coding Homo_sapiens 0 333
ENST00000584848 PYCR1-016 protein_coding Homo_sapiens 0 542
ENST00000585215 PYCR1-010 protein_coding Homo_sapiens 0 754
ENST00000585244 PYCR1-013 protein_coding Homo_sapiens 0 294
ENST00000619204 PYCR1-201 protein_coding Homo_sapiens 0 1031

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