C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: melanoma antigen family D, 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000326587 MAGED1-001 ENSG00000179222 9606 + X:51893602-51902357 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000326587
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000326587 13.835±0.00 7.785±0.00 0.694±0.00 32.929±18.05 16.329±12.42 5.336±0.00 3.758±1.70 19.551±13.50 11.071±8.46 32.988±0.00 4.518±2.72 76.739±0.59 98.173±25.32 47.934±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000785 ISS chromatin
GO:0005515 IPI protein binding
GO:0005634 ISS nucleus
GO:0005737 IEA cytoplasm
GO:0005886 IEA plasma membrane
GO:0006355 TAS regulation of transcription, DNA-templated
GO:0006915 TAS apoptotic process
GO:0032922 ISS circadian regulation of gene expression
GO:0042981 TAS regulation of apoptotic process
GO:0043065 TAS positive regulation of apoptotic process
GO:0043234 IDA protein complex
GO:0048011 TAS neurotrophin TRK receptor signaling pathway
GO:0050680 IDA negative regulation of epithelial cell proliferation
GO:0097190 TAS apoptotic signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000026142 Maged1-001 protein_coding Mus_musculus 0 2983
ENSMUST00000153386 Maged1-002 retained_intron Mus_musculus 0 1712
ENSMUST00000139375 Maged1-003 retained_intron Mus_musculus 0 953
ENSMUST00000138146 Maged1-007 retained_intron Mus_musculus 0 948
ENSMUST00000138731 Maged1-006 retained_intron Mus_musculus 0 529
ENSMUST00000141702 Maged1-005 retained_intron Mus_musculus 0 435

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