C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000026156 Rfng-001 ENSMUSG00000025158 10090 - 11:120780748-120784207 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000026156
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000026156 17.013±0.58 29.973±15.44 10.907±4.92 27.612±7.60 17.657±6.37 22.281±4.55 6.763±0.94 21.956±2.58 7.133±3.14 17.417±2.92 6.204±0.73 20.855±8.90 3.444±1.30 3.287±1.29

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004VP CIL_0004VP_0002 CGP 11:120780746-120789102

Gene Ontology

GO IDEvidence TypeGO Description
GO:0007389 IEA pattern specification process
GO:0007399 IEA nervous system development
GO:0008152 IEA metabolic process
GO:0030154 IEA cell differentiation
GO:0030173 IEA integral component of Golgi membrane
GO:0032092 IDA positive regulation of protein binding
GO:0033829 IEA O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase activity
GO:0045747 IDA positive regulation of Notch signaling pathway
GO:0046872 IEA metal ion binding
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000310496 RFNG-001 protein_coding Homo_sapiens 0 832
ENST00000582478 RFNG-002 retained_intron Homo_sapiens 0 243

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