C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004VP_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000169733-ENSG00000169727 CGP 9606 17:82047902-82057470
GeneTranscriptPositionBiotype
ENSG00000169727 (GPS1)
G protein pathway suppressor 1 		ENST00000306823 (GPS1-004) 82051909-82057470 protein_coding
ENST00000320548 (GPS1-003) 82051875-82057470 protein_coding
ENST00000392357 (GPS1-007) 82052570-82057470 retained_intron
ENST00000392358 (GPS1-006) 82051958-82057470 protein_coding
ENST00000578168 (GPS1-024) 82056524-82057470 protein_coding
ENST00000578279 (GPS1-023) 82054952-82057117 retained_intron
ENST00000578392 (GPS1-019) 82051908-82054542 nonsense_mediated_decay
ENST00000578552 (GPS1-001) 82051865-82057470 protein_coding
ENST00000578642 (GPS1-015) 82051898-82053785 retained_intron
ENST00000580141 (GPS1-016) 82051901-82056019 nonsense_mediated_decay
ENST00000580627 (GPS1-018) 82051902-82054682 nonsense_mediated_decay
ENST00000580716 (GPS1-010) 82051477-82054741 protein_coding
ENST00000580723 (GPS1-021) 82051927-82054738 nonsense_mediated_decay
ENST00000581418 (GPS1-017) 82051901-82054668 protein_coding
ENST00000581578 (GPS1-013) 82051897-82054542 protein_coding
ENST00000582327 (GPS1-008) 82050948-82054651 protein_coding
ENST00000583009 (GPS1-022) 82052233-82054569 protein_coding
ENST00000583486 (GPS1-025) 82056524-82057470 retained_intron
ENST00000583641 (GPS1-012) 82051897-82054757 protein_coding
ENST00000583885 (GPS1-014) 82051897-82054559 protein_coding
ENST00000583961 (GPS1-011) 82051500-82054586 protein_coding
ENST00000583983 (GPS1-026) 82050691-82051837 processed_transcript
ENST00000584229 (GPS1-020) 82051925-82053225 processed_transcript
ENST00000584460 (GPS1-005) 82051929-82057463 nonsense_mediated_decay
ENST00000585084 (GPS1-009) 82051175-82054968 protein_coding
ENST00000623691 (GPS1-028) 82051897-82057470 protein_coding
ENST00000623761 (GPS1-029) 82052242-82057424 protein_coding
ENST00000624957 (GPS1-027) 82051893-82057440 protein_coding
ENSG00000169733 (RFNG)
RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase 		ENST00000310496 (RFNG-001) 82047902-82051774 protein_coding
ENST00000429557 (RFNG-009) 82048553-82051434 protein_coding
ENST00000578356 (RFNG-008) 82050415-82051573 protein_coding
ENST00000578676 (RFNG-011) 82048445-82051335 retained_intron
ENST00000580793 (RFNG-006) 82047902-82050514 retained_intron
ENST00000580928 (RFNG-013) 82049793-82050759 processed_transcript
ENST00000580953 (RFNG-004) 82047906-82051562 retained_intron
ENST00000582478 (RFNG-002) 82047902-82051831 retained_intron
ENST00000583784 (RFNG-005) 82047902-82050787 retained_intron
ENST00000584463 (RFNG-010) 82050455-82051407 retained_intron
ENST00000584515 (RFNG-007) 82049907-82051586 retained_intron
ENST00000584838 (RFNG-012) 82048749-82050990 processed_transcript
CIL_0004VP_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000025158-ENSMUSG00000025156 CGP 10090 11:120780746-120789102
GeneTranscriptPositionBiotype
ENSMUSG00000025156 (Gps1)
G protein pathway suppressor 1 		ENSMUST00000100134 (Gps1-001) 120784275-120789097 protein_coding
ENSMUST00000116305 (Gps1-007) 120784305-120789102 protein_coding
ENSMUST00000132422 (Gps1-003) 120784272-120786333 retained_intron
ENSMUST00000144519 (Gps1-004) 120786772-120787761 retained_intron
ENSMUST00000153678 (Gps1-006) 120784275-120788783 nonsense_mediated_decay
ENSMUST00000156723 (Gps1-005) 120787769-120788596 retained_intron
ENSMUST00000172809 (Gps1-002) 120784515-120789102 protein_coding
ENSMUSG00000025158 (Rfng)
RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase 		ENSMUST00000026156 (Rfng-001) 120780748-120784207 protein_coding
ENSMUST00000123273 (Rfng-002) 120780746-120784185 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004VP_0001ENSG00000169727ENST00000306823ENST00000320548ENST00000392358ENST00000578279ENST00000578552ENST00000580141ENST00000580716ENST00000581418ENST00000583486ENST00000583641ENST00000584460ENST00000585084ENST00000623691ENST00000623761ENSG00000169733ENST00000310496ENST00000580793CIL_0004VP_0002ENSMUSG00000025156ENSMUST00000100134ENSMUST00000116305ENSMUST00000153678ENSMUST00000156723ENSMUST00000172809ENSMUSG00000025158ENSMUST00000026156ENSMUST00000123273
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000169727 ENST00000306823 13.138±0.00 23.713±0.00 1.586±0.00 7.130±4.30 3.423±0.00 8.244±0.00 5.780±0.00 6.590±0.00 N/A 8.648±0.00 27.069±0.00 18.831±0.00 10.424±1.58 N/A
ENST00000320548 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 17.310±4.58
ENST00000392357 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000392358 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.761±0.00 N/A N/A N/A
ENST00000578168 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000578279 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.658±0.00 N/A N/A
ENST00000578392 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000578552 18.862±0.00 14.746±0.00 N/A 6.532±3.79 28.137±0.00 10.948±0.00 7.904±6.03 36.639±0.00 13.580±10.37 14.180±0.00 32.663±25.12 21.264±8.79 23.552±9.51 35.839±0.00
ENST00000578642 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000580141 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.549±0.00 N/A 16.840±0.00 21.962±0.00 32.681±0.00
ENST00000580627 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000580716 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 19.562±0.00 22.224±0.00 N/A
ENST00000580723 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000581418 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 11.268±0.00 N/A N/A N/A
ENST00000581578 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582327 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583009 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583486 N/A N/A N/A N/A 3.232±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583641 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 43.759±0.00
ENST00000583885 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583961 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583983 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000584229 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000584460 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.780±0.00 N/A N/A N/A N/A
ENST00000585084 N/A N/A N/A N/A N/A N/A N/A N/A 3.687±0.00 N/A N/A N/A N/A N/A
ENST00000623691 N/A N/A 1.262±0.00 3.504±0.00 11.017±0.00 6.065±2.06 3.240±1.48 N/A N/A 9.995±0.00 34.255±0.00 9.708±5.49 15.097±4.91 21.452±0.00
ENST00000623761 N/A N/A N/A 7.377±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 12.910±0.00
ENST00000624957 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000169733 ENST00000310496 19.217±0.00 16.010±0.00 N/A 9.541±0.00 25.491±0.00 20.024±0.00 6.944±0.00 22.565±0.00 14.145±12.60 13.846±0.00 23.606±0.00 21.029±14.69 16.182±0.03 27.383±0.00
ENST00000429557 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000578356 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000578676 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000580793 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.944±0.00 N/A 23.007±0.00 N/A N/A
ENST00000580928 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000580953 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582478 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583784 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000584463 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000584515 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000584838 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025156 ENSMUST00000100134 15.142±4.09 14.204±1.13 18.578±2.10 26.212±14.00 14.840±1.33 12.767±1.76 6.557±1.15 10.912±2.31 9.616±5.14 15.092±1.92 5.504±1.18 25.978±7.90 10.187±3.39 12.097±0.51
ENSMUST00000116305 22.595±2.41 20.505±7.54 36.047±3.50 53.480±33.21 41.971±7.91 10.378±3.27 25.733±0.42 43.799±4.48 24.800±8.13 24.540±6.96 21.651±2.35 29.714±8.80 28.567±13.89 N/A
ENSMUST00000132422 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144519 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153678 N/A N/A N/A 15.846±0.00 N/A N/A N/A N/A N/A N/A N/A 20.678±0.00 20.479±5.71 23.519±0.00
ENSMUST00000156723 N/A N/A N/A N/A 37.805±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000172809 30.952±9.66 65.389±13.80 8.394±1.53 8.176±0.00 31.969±11.80 37.955±1.79 N/A 12.561±3.95 14.815±4.67 16.631±5.67 N/A 90.448±19.29 15.133±0.51 71.392±33.37
ENSMUSG00000025158 ENSMUST00000026156 17.013±0.58 29.973±15.44 10.907±4.92 27.612±7.60 17.657±6.37 22.281±4.55 6.763±0.94 21.956±2.58 7.133±3.14 17.417±2.92 6.204±0.73 20.855±8.90 3.444±1.30 3.287±1.29
ENSMUST00000123273 4.296±1.19 N/A 5.270±0.84 16.787±10.49 2.163±1.07 N/A 1.536±0.20 3.591±0.34 2.409±0.70 3.358±0.16 1.270±0.34 4.167±0.81 1.768±1.18 0.608±0.08

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