C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SAC1 (suppressor of actin mutations 1, homolog)-like (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000026270 Sacm1l-201 ENSMUSG00000025240 10090 + 9:123529882-123592598 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000026270
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000026270 9.772±0.46 5.196±0.51 7.054±1.41 11.371±3.18 6.778±1.83 4.754±1.31 5.244±1.73 11.875±2.17 8.931±1.74 8.353±1.09 5.910±0.68 7.520±5.45 17.563±2.49 1.779±0.73

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00073I CIL_00073I_0002 CGP 9:123478701-123592598
CIL_00073G CIL_00073G_0002 CGP 9:123529882-123632565

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004438 IEA phosphatidylinositol-3-phosphatase activity
GO:0005515 IEA protein binding
GO:0005789 ISS endoplasmic reticulum membrane
GO:0005794 IEA Golgi apparatus
GO:0008150 ND biological_process
GO:0016791 ISS phosphatase activity
GO:0030176 IEA integral component of endoplasmic reticulum membrane
GO:0032281 IDA alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective glutamate receptor complex
GO:0034593 IEA phosphatidylinositol bisphosphate phosphatase activity
GO:0043812 IEA phosphatidylinositol-4-phosphate phosphatase activity
GO:0046856 IEA phosphatidylinositol dephosphorylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000389061 SACM1L-001 protein_coding Homo_sapiens 0 3334
ENST00000418611 SACM1L-002 protein_coding Homo_sapiens 0 2523
ENST00000433336 SACM1L-012 protein_coding Homo_sapiens 0 784
ENST00000438671 SACM1L-009 protein_coding Homo_sapiens 0 270
ENST00000441228 SACM1L-003 nonsense_mediated_decay Homo_sapiens 0 2193
ENST00000445499 SACM1L-010 nonsense_mediated_decay Homo_sapiens 0 758
ENST00000455997 SACM1L-004 nonsense_mediated_decay Homo_sapiens 0 3229
ENST00000463237 SACM1L-015 retained_intron Homo_sapiens 0 741
ENST00000463347 SACM1L-008 retained_intron Homo_sapiens 0 449
ENST00000464102 SACM1L-005 retained_intron Homo_sapiens 0 1877
ENST00000464524 SACM1L-006 processed_transcript Homo_sapiens 0 625
ENST00000478586 SACM1L-007 processed_transcript Homo_sapiens 0 616
ENST00000485311 SACM1L-014 retained_intron Homo_sapiens 0 455

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