C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00073I_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000144791-ENSG00000211456 CGP 9606 3:45555394-45745424
GeneTranscriptPositionBiotype
ENSG00000144791 (LIMD1)
LIM domains containing 1 		ENST00000273317 (LIMD1-001) 45594859-45686338 protein_coding
ENST00000440097 (LIMD1-002) 45594324-45673898 protein_coding
ENST00000465039 (LIMD1-004) 45555394-45673506 processed_transcript
ENST00000474665 (LIMD1-003) 45665675-45674566 retained_intron
ENSG00000211456 (SACM1L)
SAC1 suppressor of actin mutations 1-like (yeast) 		ENST00000389061 (SACM1L-001) 45689262-45745424 protein_coding
ENST00000418611 (SACM1L-002) 45689241-45743804 protein_coding
ENST00000433336 (SACM1L-012) 45730603-45738835 protein_coding
ENST00000438671 (SACM1L-009) 45689357-45713174 protein_coding
ENST00000441228 (SACM1L-003) 45689355-45743935 nonsense_mediated_decay
ENST00000445499 (SACM1L-010) 45689459-45714082 nonsense_mediated_decay
ENST00000455997 (SACM1L-004) 45689186-45745407 nonsense_mediated_decay
ENST00000463237 (SACM1L-015) 45689262-45713411 retained_intron
ENST00000463347 (SACM1L-008) 45689356-45707318 retained_intron
ENST00000463659 (SACM1L-011) 45713196-45719565 retained_intron
ENST00000464102 (SACM1L-005) 45734595-45745408 retained_intron
ENST00000464524 (SACM1L-006) 45689056-45709648 processed_transcript
ENST00000471207 (SACM1L-013) 45737244-45738629 retained_intron
ENST00000478586 (SACM1L-007) 45689459-45709643 processed_transcript
ENST00000485311 (SACM1L-014) 45737762-45739907 retained_intron
ENSG00000244357 (RN7SL145P)
RNA, 7SL, cytoplasmic 145, pseudogene 		ENST00000469955 (RN7SL145P-201) 45742675-45742970 misc_RNA
CIL_00073I_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000025239-ENSMUSG00000025240 CGP 10090 9:123478701-123592598
GeneTranscriptPositionBiotype
ENSMUSG00000025239 (Limd1)
LIM domains containing 1 		ENSMUST00000026269 (Limd1-201) 123478701-123521548 protein_coding
ENSMUSG00000025240 (Sacm1l)
SAC1 (suppressor of actin mutations 1, homolog)-like (S. cerevisiae) 		ENSMUST00000026270 (Sacm1l-201) 123529882-123592598 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00073I_0001ENSG00000144791ENST00000273317ENST00000440097ENST00000465039ENST00000474665ENSG00000211456ENST00000389061ENST00000418611ENST00000433336ENST00000438671ENST00000441228ENST00000445499ENST00000455997ENST00000463237ENST00000463347ENST00000463659ENST00000464102ENST00000464524ENST00000471207ENST00000478586ENST00000485311ENSG00000244357ENST00000469955CIL_00073I_0002ENSMUSG00000025239ENSMUST00000026269ENSMUSG00000025240ENSMUST00000026270
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00073I_0001ENSG00000144791ENST00000273317ENST00000440097ENSG00000211456ENST00000389061ENST00000418611ENST00000433336ENST00000441228ENST00000464102ENSG00000244357ENST00000469955CIL_00073I_0002ENSMUSG00000025239ENSMUST00000026269ENSMUSG00000025240ENSMUST00000026270
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000144791 ENST00000273317 2.321±0.00 1.428±0.00 N/A N/A 1.808±0.00 1.490±0.26 2.747±0.00 N/A 2.590±0.00 3.473±1.22 2.975±1.77 1.525±0.42 1.301±0.10 1.512±0.00
ENST00000440097 N/A N/A N/A N/A 3.519±0.00 N/A N/A N/A N/A N/A 1.595±0.00 N/A N/A N/A
ENST00000465039 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474665 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000211456 ENST00000389061 6.570±0.00 5.014±0.00 2.315±0.00 7.198±3.59 4.549±1.67 6.518±0.00 5.584±0.00 13.224±0.00 3.640±0.41 6.251±1.91 N/A 3.850±1.28 4.543±0.83 5.635±2.18
ENST00000418611 N/A N/A N/A N/A N/A N/A N/A N/A 3.345±0.00 N/A N/A N/A N/A N/A
ENST00000433336 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 10.471±0.00
ENST00000438671 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000441228 N/A N/A 3.295±0.00 4.809±0.00 5.783±0.00 8.975±0.00 3.568±0.00 6.849±0.00 5.422±0.00 10.359±0.00 2.641±0.00 5.627±0.10 N/A N/A
ENST00000445499 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000455997 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463237 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463347 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463659 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464102 N/A N/A 2.092±0.00 1.942±0.00 2.853±0.00 4.198±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464524 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000471207 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478586 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485311 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000244357 ENST00000469955 0.399±0.00 1.309±0.00 N/A 1.244±0.00 0.944±0.70 0.145±0.00 0.384±0.00 0.839±0.00 0.240±0.10 2.431±1.23 0.746±0.00 0.754±0.55 0.122±0.00 0.286±0.05
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025239 ENSMUST00000026269 20.552±3.73 13.939±0.71 13.268±0.02 3.241±1.40 19.732±2.61 16.525±3.70 10.787±1.69 18.072±1.07 8.894±2.17 18.728±3.47 19.026±0.79 20.499±5.28 28.499±11.87 2.671±1.31
ENSMUSG00000025240 ENSMUST00000026270 9.772±0.46 5.196±0.51 7.054±1.41 11.371±3.18 6.778±1.83 4.754±1.31 5.244±1.73 11.875±2.17 8.931±1.74 8.353±1.09 5.910±0.68 7.520±5.45 17.563±2.49 1.779±0.73

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