C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00073G_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000211456-ENSG00000163817 CGP 9606 3:45689056-45796535
GeneTranscriptPositionBiotype
ENSG00000163817 (SLC6A20)
solute carrier family 6 (proline IMINO transporter), member 20 		ENST00000353278 (SLC6A20-002) 45755450-45796470 protein_coding
ENST00000358525 (SLC6A20-001) 45755450-45796535 protein_coding
ENST00000413781 (SLC6A20-007) 45771217-45796535 protein_coding
ENST00000456124 (SLC6A20-201) 45756004-45796483 protein_coding
ENST00000470226 (SLC6A20-006) 45790301-45796360 processed_transcript
ENST00000473146 (SLC6A20-004) 45758504-45772339 retained_intron
ENST00000493980 (SLC6A20-005) 45759980-45765770 processed_transcript
ENSG00000211456 (SACM1L)
SAC1 suppressor of actin mutations 1-like (yeast) 		ENST00000389061 (SACM1L-001) 45689262-45745424 protein_coding
ENST00000418611 (SACM1L-002) 45689241-45743804 protein_coding
ENST00000433336 (SACM1L-012) 45730603-45738835 protein_coding
ENST00000438671 (SACM1L-009) 45689357-45713174 protein_coding
ENST00000441228 (SACM1L-003) 45689355-45743935 nonsense_mediated_decay
ENST00000445499 (SACM1L-010) 45689459-45714082 nonsense_mediated_decay
ENST00000455997 (SACM1L-004) 45689186-45745407 nonsense_mediated_decay
ENST00000463237 (SACM1L-015) 45689262-45713411 retained_intron
ENST00000463347 (SACM1L-008) 45689356-45707318 retained_intron
ENST00000463659 (SACM1L-011) 45713196-45719565 retained_intron
ENST00000464102 (SACM1L-005) 45734595-45745408 retained_intron
ENST00000464524 (SACM1L-006) 45689056-45709648 processed_transcript
ENST00000471207 (SACM1L-013) 45737244-45738629 retained_intron
ENST00000478586 (SACM1L-007) 45689459-45709643 processed_transcript
ENST00000485311 (SACM1L-014) 45737762-45739907 retained_intron
ENSG00000244357 (RN7SL145P)
RNA, 7SL, cytoplasmic 145, pseudogene 		ENST00000469955 (RN7SL145P-201) 45742675-45742970 misc_RNA
ENSG00000279017 (RP11-697K23.3)
 ENST00000623173 (RP11-697K23.3-001) 45749627-45750651 TEC
CIL_00073G_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000025240-ENSMUSG00000025243 CGP 10090 9:123529882-123632565
GeneTranscriptPositionBiotype
ENSMUSG00000025240 (Sacm1l)
SAC1 (suppressor of actin mutations 1, homolog)-like (S. cerevisiae) 		ENSMUST00000026270 (Sacm1l-201) 123529882-123592598 protein_coding
ENSMUSG00000025243 (Slc6a20b)
solute carrier family 6 (neurotransmitter transporter), member 20B 		ENSMUST00000026273 (Slc6a20b-001) 123593823-123632565 protein_coding
ENSMUST00000163397 (Slc6a20b-006) 123607589-123632283 nonsense_mediated_decay
ENSMUST00000164241 (Slc6a20b-005) 123609193-123632501 processed_transcript
ENSMUST00000166800 (Slc6a20b-002) 123593820-123632399 retained_intron
ENSMUST00000168824 (Slc6a20b-003) 123594829-123632327 nonsense_mediated_decay
ENSMUST00000171122 (Slc6a20b-004) 123594823-123628562 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00073G_0001ENSG00000163817ENST00000353278ENST00000358525ENST00000413781ENST00000456124ENST00000470226ENST00000473146ENST00000493980ENSG00000211456ENST00000389061ENST00000418611ENST00000433336ENST00000438671ENST00000441228ENST00000445499ENST00000455997ENST00000463237ENST00000463347ENST00000463659ENST00000464102ENST00000464524ENST00000471207ENST00000478586ENST00000485311ENSG00000244357ENST00000469955ENSG00000279017ENST00000623173CIL_00073G_0002ENSMUSG00000025240ENSMUST00000026270ENSMUSG00000025243ENSMUST00000026273ENSMUST00000163397ENSMUST00000164241ENSMUST00000166800ENSMUST00000168824ENSMUST00000171122
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00073G_0001ENSG00000163817ENST00000353278ENST00000358525ENST00000413781ENST00000456124ENST00000470226ENST00000473146ENST00000493980ENSG00000211456ENST00000389061ENST00000418611ENST00000433336ENST00000441228ENST00000464102ENSG00000244357ENST00000469955ENSG00000279017ENST00000623173CIL_00073G_0002ENSMUSG00000025240ENSMUST00000026270ENSMUSG00000025243ENSMUST00000026273ENSMUST00000163397ENSMUST00000164241ENSMUST00000166800ENSMUST00000168824ENSMUST00000171122
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000163817 ENST00000353278 0.463±0.00 0.213±0.00 N/A N/A 0.023±0.00 0.030±0.02 N/A N/A 0.011±0.00 N/A N/A 1.771±0.94 0.029±0.01 0.367±0.00
ENST00000358525 N/A N/A 0.452±0.00 0.452±0.00 N/A N/A N/A 0.581±0.00 N/A 0.338±0.00 N/A 5.472±0.00 N/A N/A
ENST00000413781 N/A N/A N/A N/A 0.319±0.00 N/A N/A N/A N/A N/A N/A N/A 0.047±0.00 N/A
ENST00000456124 N/A N/A N/A N/A N/A 0.039±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470226 N/A N/A N/A N/A N/A 0.207±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473146 N/A N/A 0.484±0.00 0.316±0.00 0.089±0.00 N/A N/A N/A N/A 0.030±0.00 N/A N/A N/A N/A
ENST00000493980 N/A N/A N/A N/A 0.988±0.00 0.262±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000211456 ENST00000389061 6.570±0.00 5.014±0.00 2.315±0.00 7.198±3.59 4.549±1.67 6.518±0.00 5.584±0.00 13.224±0.00 3.640±0.41 6.251±1.91 N/A 3.850±1.28 4.543±0.83 5.635±2.18
ENST00000418611 N/A N/A N/A N/A N/A N/A N/A N/A 3.345±0.00 N/A N/A N/A N/A N/A
ENST00000433336 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 10.471±0.00
ENST00000438671 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000441228 N/A N/A 3.295±0.00 4.809±0.00 5.783±0.00 8.975±0.00 3.568±0.00 6.849±0.00 5.422±0.00 10.359±0.00 2.641±0.00 5.627±0.10 N/A N/A
ENST00000445499 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000455997 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463237 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463347 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463659 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464102 N/A N/A 2.092±0.00 1.942±0.00 2.853±0.00 4.198±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464524 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000471207 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478586 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485311 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000244357 ENST00000469955 0.399±0.00 1.309±0.00 N/A 1.244±0.00 0.944±0.70 0.145±0.00 0.384±0.00 0.839±0.00 0.240±0.10 2.431±1.23 0.746±0.00 0.754±0.55 0.122±0.00 0.286±0.05
ENSG00000279017 ENST00000623173 0.100±0.00 0.029±0.00 0.056±0.00 0.075±0.00 0.045±0.00 0.057±0.03 0.057±0.00 0.954±0.00 0.037±0.00 0.074±0.00 0.025±0.00 0.276±0.30 N/A 0.112±0.03
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025240 ENSMUST00000026270 9.772±0.46 5.196±0.51 7.054±1.41 11.371±3.18 6.778±1.83 4.754±1.31 5.244±1.73 11.875±2.17 8.931±1.74 8.353±1.09 5.910±0.68 7.520±5.45 17.563±2.49 1.779±0.73
ENSMUSG00000025243 ENSMUST00000026273 N/A N/A N/A N/A 0.041±0.02 N/A N/A 41.939±8.02 0.030±0.02 0.031±0.01 N/A 0.168±0.14 0.176±0.01 0.148±0.00
ENSMUST00000163397 N/A 0.166±0.05 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.590±0.13 N/A N/A
ENSMUST00000164241 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.429±0.00 N/A N/A
ENSMUST00000166800 0.034±0.02 0.036±0.01 0.014±0.00 0.101±0.05 0.029±0.01 0.069±0.02 0.013±0.01 11.347±3.52 0.146±0.10 0.055±0.01 0.016±0.01 0.070±0.05 0.037±0.04 N/A
ENSMUST00000168824 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.514±0.09 N/A N/A
ENSMUST00000171122 0.018±0.00 N/A N/A 0.026±0.00 0.035±0.00 N/A N/A 70.538±14.09 N/A 0.034±0.00 0.015±0.00 0.439±0.34 0.141±0.09 0.631±0.16

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