C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: biogenesis of lysosomal organelles complex-1, subunit 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000026405 Bloc1s1-001 ENSMUSG00000090247 10090 - 10:128919914-128923524 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000026405
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000026405 132.047±31.93 67.625±6.61 176.553±9.26 102.834±42.81 91.715±21.82 83.507±10.23 105.297±10.66 169.941±8.01 99.224±27.91 95.013±11.87 78.416±4.37 126.288±13.49 77.175±44.81 53.319±9.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007HO CIL_0007HO_0002 CGP 10:128913593-128924035

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005739 IDA mitochondrion
GO:0005758 IDA mitochondrial intermembrane space
GO:0005759 IDA mitochondrial matrix
GO:0005829 IDA cytosol
GO:0008089 IMP anterograde axon cargo transport
GO:0009060 ISS aerobic respiration
GO:0018394 ISS peptidyl-lysine acetylation
GO:0031083 IDA BLOC-1 complex
GO:0031175 NAS neuron projection development
GO:0048490 IMP anterograde synaptic vesicle transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000257899 BLOC1S1-004 nonsense_mediated_decay Homo_sapiens 0 436
ENST00000547076 BLOC1S1-006 protein_coding Homo_sapiens 0 499
ENST00000548556 BLOC1S1-007 protein_coding Homo_sapiens 0 401
ENST00000548925 BLOC1S1-001 protein_coding Homo_sapiens 0 612
ENST00000549147 BLOC1S1-002 protein_coding Homo_sapiens 0 436
ENST00000549424 BLOC1S1-003 protein_coding Homo_sapiens 0 226
ENST00000550412 BLOC1S1-001 protein_coding Homo_sapiens 0 436
ENST00000551926 BLOC1S1-008 protein_coding Homo_sapiens 0 324
ENST00000551946 BLOC1S1-002 nonsense_mediated_decay Homo_sapiens 0 230
ENST00000553100 BLOC1S1-005 nonsense_mediated_decay Homo_sapiens 0 405

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