C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: myosin, light polypeptide 6B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000026428 Myl6b-201 ENSMUSG00000039824 10090 - 10:128494157-128498685 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000026428
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000026428 5.021±1.86 2.291±0.60 1.545±0.06 26.672±21.78 2.311±1.16 0.999±0.31 1.282±0.32 4.113±0.46 1.016±0.63 0.970±0.19 5.612±2.03 2.628±1.87 6.120±5.40 18.370±14.11

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003774 TAS motor activity
GO:0005509 IEA calcium ion binding
GO:0005515 IEA protein binding
GO:0006936 TAS muscle contraction
GO:0007519 TAS skeletal muscle tissue development
GO:0008152 TAS metabolic process
GO:0008307 TAS structural constituent of muscle
GO:0016459 TAS myosin complex
GO:0016461 TAS unconventional myosin complex
GO:0030049 TAS muscle filament sliding
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000293422 MYL6-023 protein_coding Homo_sapiens 0 375
ENST00000348108 MYL6-024 protein_coding Homo_sapiens 0 387
ENST00000405661 MYL6B-002 retained_intron Homo_sapiens 0 750
ENST00000436904 MYL6P3-001 processed_pseudogene Homo_sapiens 0 219
ENST00000536128 MYL6-005 protein_coding Homo_sapiens 0 375
ENST00000546630 MYL6-021 retained_intron Homo_sapiens 0 204
ENST00000547408 MYL6-007 protein_coding Homo_sapiens 0 375
ENST00000547649 MYL6-002 protein_coding Homo_sapiens 0 375
ENST00000547703 MYL6-012 retained_intron Homo_sapiens 0 204
ENST00000548293 MYL6-010 protein_coding Homo_sapiens 0 387
ENST00000548548 MYL6B-012 retained_intron Homo_sapiens 3e-37 159
ENST00000548571 MYL6B-013 processed_transcript Homo_sapiens 1e-35 152
ENST00000548725 MYL6-015 retained_intron Homo_sapiens 0 305
ENST00000549178 MYL6B-006 retained_intron Homo_sapiens 0 579
ENST00000549392 MYL6-022 protein_coding Homo_sapiens 0 350
ENST00000550152 MYL6B-005 processed_transcript Homo_sapiens 0 730
ENST00000550184 MYL6-004 retained_intron Homo_sapiens 0 387
ENST00000550443 MYL6B-001 protein_coding Homo_sapiens 0 880
ENST00000550550 MYL6B-009 retained_intron Homo_sapiens 2e-35 152
ENST00000550639 MYL6-017 processed_transcript Homo_sapiens 0 307
ENST00000550697 MYL6-003 protein_coding Homo_sapiens 0 387
ENST00000551589 MYL6-001 protein_coding Homo_sapiens 0 375
ENST00000551834 MYL6B-004 protein_coding Homo_sapiens 3.00004e-41 172
ENST00000552568 MYL6B-011 protein_coding Homo_sapiens 0 614
ENST00000553066 MYL6B-003 protein_coding Homo_sapiens 0 904

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