C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: myosin, light chain 6, alkali, smooth muscle and non-muscle
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000548293 MYL6-010 ENSG00000092841 9606 + 12:56158396-56160945 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderENST00000548293
Transcript ID Bladder
ENST00000548293 18.671±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003774 TAS motor activity
GO:0005509 IEA calcium ion binding
GO:0005515 IPI protein binding
GO:0005829 TAS cytosol
GO:0006200 ISS ATP catabolic process
GO:0006936 TAS muscle contraction
GO:0007411 TAS axon guidance
GO:0007519 TAS skeletal muscle tissue development
GO:0008152 TAS metabolic process
GO:0008307 IDA structural constituent of muscle
GO:0016020 IDA membrane
GO:0016459 TAS myosin complex
GO:0016461 TAS unconventional myosin complex
GO:0030049 TAS muscle filament sliding
GO:0030898 ISS actin-dependent ATPase activity
GO:0031982 IDA vesicle
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000164181 Myl6-201 protein_coding Mus_musculus 0 693
ENSMUST00000075585 Gm10080-201 pseudogene Mus_musculus 0 667
ENSMUST00000116136 Gm5915-001 processed_pseudogene Mus_musculus 0 664
ENSMUST00000121022 Gm11836-001 processed_pseudogene Mus_musculus 0 662
ENSMUST00000074642 Gm8894-201 processed_pseudogene Mus_musculus 0 651
ENSMUST00000153604 Gm5526-001 processed_pseudogene Mus_musculus 0 612
ENSMUST00000026428 Myl6b-201 protein_coding Mus_musculus 0 387

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