C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Ngfi-A binding protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000026469 Nab2-001 ENSMUSG00000025402 10090 - 10:127660918-127666710 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000026469
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000026469 15.738±0.19 16.496±0.82 15.230±0.59 3.031±0.92 17.425±2.22 8.714±1.17 4.850±0.00 8.765±1.87 5.829±1.78 15.653±1.58 30.475±2.41 5.105±1.04 10.644±0.17

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001958 IGI endochondral ossification
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IGI regulation of transcription, DNA-templated
GO:0008134 IDA transcription factor binding
GO:0014037 IGI Schwann cell differentiation
GO:0016480 ISO negative regulation of transcription from RNA polymerase III promoter
GO:0042552 IGI myelination
GO:0045682 IGI regulation of epidermis development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000300131 NAB2-001 protein_coding Homo_sapiens 0 2407
ENST00000300134 STAT6-001 protein_coding Homo_sapiens 4e-27 128
ENST00000337386 NAB1-001 protein_coding Homo_sapiens 1e-28 134
ENST00000342556 NAB2-002 protein_coding Homo_sapiens 0 1716
ENST00000409581 NAB1-003 protein_coding Homo_sapiens 5e-29 134
ENST00000409641 NAB1-010 protein_coding Homo_sapiens 6e-29 134
ENST00000416973 NAB1-005 protein_coding Homo_sapiens 1e-29 134
ENST00000423076 NAB1-009 protein_coding Homo_sapiens 3e-25 119
ENST00000423376 NAB1-008 protein_coding Homo_sapiens 1e-18 97
ENST00000426601 NAB1-004 protein_coding Homo_sapiens 1e-29 134
ENST00000448811 NAB1-006 protein_coding Homo_sapiens 1e-29 134
ENST00000458074 AF013593.1-001 processed_pseudogene Homo_sapiens 2e-26 124
ENST00000554718 NAB2-007 processed_transcript Homo_sapiens 0 728
ENST00000554839 NAB2-006 retained_intron Homo_sapiens 0 364
ENST00000555857 NAB2-005 processed_transcript Homo_sapiens 0 370

Loading