C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: NGFI-A binding protein 1 (EGR1 binding protein 1)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000337386 NAB1-001 ENSG00000138386 9606 + 2:190649233-190692766 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartKidneyLungMuscleOvaryPlacentaTestisENST00000337386
Transcript ID Adrenal Brain Breast Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000337386 2.584±0.00 2.448±0.00 3.217±0.87 2.202±1.11 1.402±0.00 1.460±0.30 5.055±0.00 0.207±0.00 6.747±4.21 2.311±0.89 3.004±0.38

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001958 IEA endochondral ossification
GO:0005634 IEA:NAS nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 NAS regulation of transcription, DNA-templated
GO:0008134 IEA transcription factor binding
GO:0014037 IEA Schwann cell differentiation
GO:0042552 IEA myelination
GO:0045682 IEA regulation of epidermis development
GO:0045892 IEA:NAS negative regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000069792 Nab1-001 protein_coding Mus_musculus 0 2013
ENSMUST00000186764 Nab1-003 protein_coding Mus_musculus 0 2004
ENSMUST00000119977 Gm13361-001 processed_pseudogene Mus_musculus 0 1238
ENSMUST00000170269 Nab1-002 protein_coding Mus_musculus 0 1221
ENSMUST00000168082 Nab1-004 processed_transcript Mus_musculus 0 462
ENSMUST00000167732 Nab1-005 retained_intron Mus_musculus 0 416
ENSMUST00000099157 Nab2-002 protein_coding Mus_musculus 1e-28 134
ENSMUST00000026469 Nab2-001 protein_coding Mus_musculus 1e-28 134
ENSMUST00000128780 Nab2-004 protein_coding Mus_musculus 3e-19 102

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