C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: NGFI-A binding protein 1 (EGR1 binding protein 1)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000409581 NAB1-003 ENSG00000138386 9606 + 2:190649070-190690919 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonHeartKidneyLiverMuscleOvaryENST00000409581
Transcript ID Bladder Brain Colon Heart Kidney Liver Muscle Ovary
ENST00000409581 0.884±0.00 1.626±0.00 3.794±0.00 1.653±0.00 1.913±0.00 2.279±0.00 0.973±0.36 4.544±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IEA:NAS nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 NAS regulation of transcription, DNA-templated
GO:0045892 IEA:NAS negative regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000069792 Nab1-001 protein_coding Mus_musculus 0 2006
ENSMUST00000186764 Nab1-003 protein_coding Mus_musculus 0 1984
ENSMUST00000119977 Gm13361-001 processed_pseudogene Mus_musculus 0 1238
ENSMUST00000170269 Nab1-002 protein_coding Mus_musculus 0 1221
ENSMUST00000168082 Nab1-004 processed_transcript Mus_musculus 0 462
ENSMUST00000167732 Nab1-005 retained_intron Mus_musculus 0 416
ENSMUST00000099157 Nab2-002 protein_coding Mus_musculus 5e-29 134
ENSMUST00000026469 Nab2-001 protein_coding Mus_musculus 5e-29 134
ENSMUST00000128780 Nab2-004 protein_coding Mus_musculus 2e-19 102

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