C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: BTB and CNC homology 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000026703 Bach1-001 ENSMUSG00000025612 10090 + 16:87698945-87733346 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000026703
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000026703 5.605±1.63 5.796±0.50 3.272±0.04 4.971±3.41 6.339±2.03 9.574±0.70 3.256±0.29 4.372±0.37 4.749±0.97 12.324±1.60 5.463±0.55 7.553±1.79 6.991±2.12 0.520±0.15

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003DA CIL_0003DA_0002 CGP 16:87553330-87733346
CIL_000317 CIL_000317_0002 CGP 16:87698945-88056176

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000083 IEA regulation of transcription involved in G1/S transition of mitotic cell cycle
GO:0000117 IEA regulation of transcription involved in G2/M transition of mitotic cell cycle
GO:0000122 IDA negative regulation of transcription from RNA polymerase II promoter
GO:0000980 IDA RNA polymerase II distal enhancer sequence-specific DNA binding
GO:0001078 IEA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription
GO:0001205 IDA RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0001206 IDA RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription
GO:0003677 IDA DNA binding
GO:0003700 IDA sequence-specific DNA binding transcription factor activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005829 IEA cytosol
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IDA regulation of transcription, DNA-templated
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0061418 IEA regulation of transcription from RNA polymerase II promoter in response to hypoxia

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000286800 BACH1-001 protein_coding Homo_sapiens 0 1661
ENST00000399921 BACH1-002 protein_coding Homo_sapiens 0 1626
ENST00000435072 BACH1-003 protein_coding Homo_sapiens 0 540
ENST00000447177 BACH1-005 protein_coding Homo_sapiens 0 617
ENST00000451655 BACH1-004 protein_coding Homo_sapiens 0 638

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