C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: BTB and CNC homology 1, basic leucine zipper transcription factor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000399921 BACH1-002 ENSG00000156273 9606 + 21:29299416-29346148 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeHeartKidneyLiverLungOvaryPlacentaTestisENST00000399921
Transcript ID Adipose Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000399921 0.842±0.00 0.647±0.00 0.480±0.00 2.497±0.00 1.688±0.32 1.378±0.00 1.642±0.11 2.954±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003DA CIL_0003DA_0001 CGP 21:29077471-29630751
CIL_000317 CIL_000317_0001 CGP 21:29194071-29940033

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000083 IMP regulation of transcription involved in G1/S transition of mitotic cell cycle
GO:0000117 IMP regulation of transcription involved in G2/M transition of mitotic cell cycle
GO:0000122 IMP negative regulation of transcription from RNA polymerase II promoter
GO:0000980 IEA RNA polymerase II distal enhancer sequence-specific DNA binding
GO:0001078 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription
GO:0001205 IEA RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0001206 IEA RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription
GO:0003677 IEA DNA binding
GO:0003700 ISS:IEA sequence-specific DNA binding transcription factor activity
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005829 IDA cytosol
GO:0006351 IEA transcription, DNA-templated
GO:0006355 ISS:IEA regulation of transcription, DNA-templated
GO:0020037 NAS heme binding
GO:0043565 IEA sequence-specific DNA binding
GO:0045944 IEA positive regulation of transcription from RNA polymerase II promoter
GO:0061418 IDA regulation of transcription from RNA polymerase II promoter in response to hypoxia

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000026703 Bach1-001 protein_coding Mus_musculus 0 1626
ENSMUST00000156958 Bach1-002 retained_intron Mus_musculus 0 1369
ENSMUST00000151046 Bach1-003 processed_transcript Mus_musculus 0 355

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