C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: arachidonate 5-lipoxygenase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000026795 Alox5-001 ENSMUSG00000025701 10090 - 6:116410077-116461178 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000026795
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000026795 1.746±0.17 0.982±0.19 1.107±0.02 2.032±0.35 1.770±0.29 2.936±0.25 0.181±0.05 1.448±0.80 3.638±0.41 0.102±0.07 0.353±0.13 0.212±0.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00081B CIL_00081B_0002 VISTA 6:116052182-116663911

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002540 IMP leukotriene production involved in inflammatory response
GO:0004051 IEA arachidonate 5-lipoxygenase activity
GO:0005506 ISS iron ion binding
GO:0005515 IPI protein binding
GO:0005615 IEA extracellular space
GO:0005634 IDA nucleus
GO:0005635 IEA nuclear envelope
GO:0005641 ISS nuclear envelope lumen
GO:0005737 IDA cytoplasm
GO:0005829 ISS cytosol
GO:0006691 IMP leukotriene metabolic process
GO:0006954 IMP inflammatory response
GO:0016363 IEA nuclear matrix
GO:0019370 IDA leukotriene biosynthetic process
GO:0031965 ISS nuclear membrane
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000374391 ALOX5-001 protein_coding Homo_sapiens 0 2403
ENST00000475300 ALOX5-004 processed_transcript Homo_sapiens 0 368
ENST00000483623 ALOX5-003 processed_transcript Homo_sapiens 0 267
ENST00000542434 ALOX5-201 protein_coding Homo_sapiens 0 2041
ENST00000610656 ALOX5-001 protein_coding Homo_sapiens 0 2403
ENST00000612635 ALOX5-202 protein_coding Homo_sapiens 0 1857
ENST00000616521 ALOX5-004 processed_transcript Homo_sapiens 0 368
ENST00000622021 ALOX5-203 protein_coding Homo_sapiens 0 2041
ENST00000622238 ALOX5-204 protein_coding Homo_sapiens 0 1857
ENST00000622781 ALOX5-003 processed_transcript Homo_sapiens 0 261

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