C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: thymidylate synthase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000026846 Tyms-001 ENSMUSG00000025747 10090 - 5:30058827-30073617 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000026846
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000026846 1.985±0.90 1.828±0.54 1.164±0.20 3.075±2.70 1.538±0.51 3.493±0.48 0.621±0.12 2.138±0.46 4.961±3.56 1.893±0.15 0.453±0.12 3.202±1.35 2.185±1.65 1.770±0.74

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003729 IEA mRNA binding
GO:0004799 IEA thymidylate synthase activity
GO:0005542 IEA folic acid binding
GO:0005634 ISS nucleus
GO:0005730 IEA nucleolus
GO:0005737 ISS cytoplasm
GO:0005739 ISS mitochondrion
GO:0005743 ISS mitochondrial inner membrane
GO:0005759 ISS mitochondrial matrix
GO:0006206 IEA pyrimidine nucleobase metabolic process
GO:0006235 IEA dTTP biosynthetic process
GO:0007568 IEA aging
GO:0007623 IEA circadian rhythm
GO:0008144 IEA drug binding
GO:0009636 IEA response to toxic substance
GO:0014070 IEA response to organic cyclic compound
GO:0019088 IEA immortalization of host cell by virus
GO:0019860 IEA uracil metabolic process
GO:0031100 IEA organ regeneration
GO:0032259 IEA methylation
GO:0032570 IEA response to progesterone
GO:0033189 IEA response to vitamin A
GO:0034097 IEA response to cytokine
GO:0042493 IEA response to drug
GO:0042803 IEA protein homodimerization activity
GO:0045471 IEA response to ethanol
GO:0046078 IEA dUMP metabolic process
GO:0046653 IEA tetrahydrofolate metabolic process
GO:0046683 IEA response to organophosphorus
GO:0048037 IEA cofactor binding
GO:0048589 IEA developmental growth
GO:0051216 IEA cartilage development
GO:0051384 IEA response to glucocorticoid
GO:0051593 IEA response to folic acid
GO:0060574 IEA intestinal epithelial cell maturation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000323224 TYMS-002 protein_coding Homo_sapiens 0 492
ENST00000323250 TYMS-003 protein_coding Homo_sapiens 0 606
ENST00000323274 TYMS-001 protein_coding Homo_sapiens 0 1062
ENST00000383578 ENOSF1-201 protein_coding Homo_sapiens 7e-20 104
ENST00000579128 TYMS-006 retained_intron Homo_sapiens 0 575
ENST00000581920 TYMS-005 processed_transcript Homo_sapiens 0 621
ENST00000584259 ENOSF1-005 retained_intron Homo_sapiens 1e-19 104

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