C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: exosome component 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000026891 Exosc7-001 ENSMUSG00000025785 10090 + 9:123113215-123136129 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000026891
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000026891 10.492±2.33 4.736±0.56 34.106±8.46 21.236±6.02 6.035±1.86 8.319±1.15 11.959±1.94 20.231±4.14 35.904±24.68 32.494±2.50 9.252±0.87 16.273±4.13 24.783±9.49 8.639±1.16

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00073X CIL_00073X_0002 CGP 9:123066160-123136129
CIL_00041W CIL_00041W_0003 CGP 9:123113215-123157430

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000178 ISS exosome (RNase complex)
GO:0003723 IEA RNA binding
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006364 IEA rRNA processing

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000265564 EXOSC7-001 protein_coding Homo_sapiens 0 1158
ENST00000459856 EXOSC7-010 processed_transcript Homo_sapiens 3e-24 115
ENST00000461361 EXOSC7-002 processed_transcript Homo_sapiens 0 1072
ENST00000467846 EXOSC7-003 retained_intron Homo_sapiens 0 675
ENST00000468667 EXOSC7-008 processed_transcript Homo_sapiens 0 774
ENST00000477865 EXOSC7-007 processed_transcript Homo_sapiens 1e-30 135
ENST00000482004 EXOSC7-012 processed_transcript Homo_sapiens 0 706
ENST00000486727 EXOSC7-004 retained_intron Homo_sapiens 0 490
ENST00000491476 EXOSC7-005 processed_transcript Homo_sapiens 0 1140
ENST00000498168 EXOSC7-006 processed_transcript Homo_sapiens 6e-32 141

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