C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00041W_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000043336-ENSDARG00000074394 CGP 7955 19:3372115-3390635
GeneTranscriptPositionBiotype
ENSDARG00000043336 (exosc7)
exosome component 7 		ENSDART00000063618 (exosc7-201) 3372115-3381401 protein_coding
ENSDARG00000074394 (CABZ01049058.1)
Uncharacterized protein 		ENSDART00000046344 (CABZ01049058.1-201) 3386905-3390635 protein_coding
CIL_00041W_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000075914-ENSG00000163815 CGP 9606 3:44975241-45036071
GeneTranscriptPositionBiotype
ENSG00000075914 (EXOSC7)
exosome component 7 		ENST00000265564 (EXOSC7-001) 44976230-45011470 protein_coding
ENST00000459856 (EXOSC7-010) 45011233-45012668 processed_transcript
ENST00000461361 (EXOSC7-002) 44975241-45012666 processed_transcript
ENST00000467846 (EXOSC7-003) 44976251-45002239 retained_intron
ENST00000468667 (EXOSC7-008) 44976251-45012253 processed_transcript
ENST00000477865 (EXOSC7-007) 44975357-44989242 processed_transcript
ENST00000481405 (EXOSC7-009) 44976276-45036066 processed_transcript
ENST00000482004 (EXOSC7-012) 44975468-45005375 processed_transcript
ENST00000486727 (EXOSC7-004) 45004160-45011470 retained_intron
ENST00000491476 (EXOSC7-005) 44976264-45012633 processed_transcript
ENST00000498168 (EXOSC7-006) 44977092-44989242 processed_transcript
ENSG00000163812 (ZDHHC3)
zinc finger, DHHC-type containing 3 		ENST00000296127 (ZDHHC3-001) 44924846-44976182 protein_coding
ENST00000339420 (ZDHHC3-003) 44915257-44945196 protein_coding
ENST00000342790 (ZDHHC3-005) 44926613-44976166 protein_coding
ENST00000419642 (ZDHHC3-010) 44933188-44959432 nonsense_mediated_decay
ENST00000424952 (ZDHHC3-002) 44925171-44976177 protein_coding
ENST00000433512 (ZDHHC3-007) 44929306-44945329 protein_coding
ENST00000443879 (ZDHHC3-009) 44919978-44929352 protein_coding
ENST00000455235 (ZDHHC3-004) 44933138-44976185 protein_coding
ENST00000466084 (ZDHHC3-006) 44917409-44919338 processed_transcript
ENST00000478669 (ZDHHC3-011) 44945168-44969931 processed_transcript
ENST00000479314 (ZDHHC3-008) 44926523-44933449 retained_intron
ENSG00000163815 (CLEC3B)
C-type lectin domain family 3, member B 		ENST00000296130 (CLEC3B-001) 45026183-45036071 protein_coding
ENST00000428034 (CLEC3B-002) 45030130-45036068 protein_coding
ENST00000490386 (CLEC3B-003) 45001548-45036071 processed_transcript
ENSG00000252410 (RNU5B-3P)
RNA, U5B small nuclear 3, pseudogene 		ENST00000516601 (RNU5B-3P-201) 45034474-45034588 snRNA
CIL_00041W_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000025785-ENSMUSG00000025784 CGP 10090 9:123113215-123157430
GeneTranscriptPositionBiotype
ENSMUSG00000025784 (Clec3b)
C-type lectin domain family 3, member b 		ENSMUST00000026890 (Clec3b-201) 123150946-123157430 protein_coding
ENSMUSG00000025785 (Exosc7)
exosome component 7 		ENSMUST00000026891 (Exosc7-001) 123113215-123136129 protein_coding
ENSMUST00000159376 (Exosc7-002) 123113258-123119784 retained_intron
ENSMUST00000161569 (Exosc7-003) 123126385-123130928 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00041W_0001ENSDARG00000043336ENSDART00000063618ENSDARG00000074394ENSDART00000046344CIL_00041W_0002ENSG00000075914ENST00000265564ENST00000459856ENST00000461361ENST00000467846ENST00000468667ENST00000477865ENST00000481405ENST00000482004ENST00000486727ENST00000491476ENST00000498168ENSG00000163812ENST00000296127ENST00000339420ENST00000342790ENST00000419642ENST00000424952ENST00000433512ENST00000443879ENST00000455235ENST00000466084ENST00000478669ENST00000479314ENSG00000163815ENST00000296130ENST00000428034ENST00000490386ENSG00000252410ENST00000516601CIL_00041W_0003ENSMUSG00000025784ENSMUST00000026890ENSMUSG00000025785ENSMUST00000026891ENSMUST00000159376ENSMUST00000161569
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00041W_0001ENSDARG00000043336ENSDART00000063618ENSDARG00000074394ENSDART00000046344CIL_00041W_0002ENSG00000075914ENST00000265564ENST00000467846ENST00000482004ENST00000486727ENST00000491476ENSG00000163812ENST00000296127ENST00000339420ENST00000342790ENST00000419642ENST00000424952ENST00000479314ENSG00000163815ENST00000296130ENST00000428034ENST00000490386ENSG00000252410ENST00000516601CIL_00041W_0003ENSMUSG00000025784ENSMUST00000026890ENSMUSG00000025785ENSMUST00000026891ENSMUST00000159376
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000043336 ENSDART00000063618 N/A N/A N/A 4.391±4.34 N/A N/A 8.738±0.17 22.760±0.00 4.186±0.00 N/A 4.546±0.00 N/A N/A N/A
ENSDARG00000074394 ENSDART00000046344 N/A N/A N/A 1.544±0.32 N/A N/A 1.065±0.15 N/A 0.116±0.00 N/A 7.985±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000075914 ENST00000265564 12.038±0.00 14.214±0.00 N/A 5.162±2.29 N/A 4.561±1.91 6.620±4.94 16.860±0.00 6.699±0.00 9.407±4.23 7.606±4.81 15.411±3.89 14.439±0.00 23.499±2.35
ENST00000459856 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000461361 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467846 N/A N/A N/A N/A N/A 1.046±0.00 N/A N/A N/A N/A N/A 1.331±0.00 N/A N/A
ENST00000468667 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477865 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481405 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482004 N/A N/A N/A N/A 3.609±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486727 N/A N/A N/A 1.513±0.00 N/A 1.132±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491476 N/A 5.477±0.00 N/A 1.429±0.00 N/A 4.105±0.00 0.711±0.00 N/A 2.576±0.00 N/A 2.165±0.33 5.108±1.53 N/A N/A
ENST00000498168 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000163812 ENST00000296127 N/A N/A N/A N/A N/A 2.178±0.00 N/A N/A N/A N/A N/A 3.493±0.00 N/A N/A
ENST00000339420 3.198±0.00 N/A N/A 2.363±1.29 6.239±0.00 N/A N/A 5.586±0.00 1.598±0.78 6.720±0.00 2.418±0.00 3.982±1.85 6.048±1.22 18.888±0.00
ENST00000342790 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 20.519±0.00 23.395±0.00 65.288±0.00
ENST00000419642 N/A N/A N/A N/A N/A N/A N/A N/A N/A 19.635±0.00 N/A N/A N/A N/A
ENST00000424952 18.655±0.00 13.682±0.00 1.674±0.00 5.774±2.93 18.235±11.20 10.104±2.46 8.916±7.56 10.172±6.45 4.937±1.71 6.507±2.00 5.860±3.82 11.160±4.17 16.783±1.10 17.745±3.40
ENST00000433512 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000443879 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000455235 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466084 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478669 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479314 N/A N/A 4.300±0.00 N/A N/A N/A N/A 3.047±0.00 N/A N/A N/A N/A N/A 58.351±0.00
ENSG00000163815 ENST00000296130 32.532±0.00 33.761±0.00 3.097±0.00 7.501±4.68 147.907±142.87 20.588±12.93 20.729±17.41 15.470±8.12 21.188±3.77 88.684±70.76 7.559±0.00 20.177±20.23 352.273±162.49 101.180±34.81
ENST00000428034 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 39.859±8.34
ENST00000490386 15.811±0.00 24.100±0.00 N/A N/A 100.204±0.00 13.372±0.00 N/A 21.215±0.00 N/A N/A 6.721±0.00 N/A 89.450±0.00 N/A
ENSG00000252410 ENST00000516601 N/A N/A N/A N/A N/A N/A 13.674±0.00 0.839±0.00 N/A N/A N/A 1.444±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025784 ENSMUST00000026890 148.364±54.79 23.517±6.43 276.258±41.64 2.354±1.16 170.329±61.78 56.683±12.22 27.577±2.87 10.142±2.40 0.264±0.18 79.188±9.95 22.505±4.08 39.089±10.10 2.353±4.23 4.789±2.13
ENSMUSG00000025785 ENSMUST00000026891 10.492±2.33 4.736±0.56 34.106±8.46 21.236±6.02 6.035±1.86 8.319±1.15 11.959±1.94 20.231±4.14 35.904±24.68 32.494±2.50 9.252±0.87 16.273±4.13 24.783±9.49 8.639±1.16
ENSMUST00000159376 N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.348±0.00 N/A 6.608±0.83 N/A N/A
ENSMUST00000161569 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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