C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: lysophospholipase I pseudogene 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000513113 LYPLA1P2-001 ENSG00000251483 9606 - 4:110945109-110945799 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeKidneyPlacentaTestisENST00000513113
Transcript ID Adipose Kidney Placenta Testis
ENST00000513113 0.020±0.00 0.021±0.00 0.060±0.00 0.019±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000912 CIL_000912_0001 VISTA 4:110357117-110957671
CIL_0007ZJ CIL_0007ZJ_0001 VISTA 4:110448103-111050012
CIL_0007RD CIL_0007RD_0001 VISTA 4:110613299-111214576
CIL_0007P9 CIL_0007P9_0001 UCNEbase 4:110617607-112523533
CIL_0008B5 CIL_0008B5_0001 VISTA 4:110693705-111296453
CIL_0007RM CIL_0007RM_0001 VISTA 4:110814800-111416404
CIL_0007ZK CIL_0007ZK_0001 VISTA 4:110909820-111511229

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000027036 Lypla1-001 protein_coding Mus_musculus 0 741
ENSMUST00000150971 Lypla1-003 protein_coding Mus_musculus 0 660
ENSMUST00000134384 Lypla1-002 nonsense_mediated_decay Mus_musculus 0 658
ENSMUST00000131119 Lypla1-006 protein_coding Mus_musculus 0 562
ENSMUST00000155020 Lypla1-005 nonsense_mediated_decay Mus_musculus 0 558
ENSMUST00000115529 Lypla1-008 protein_coding Mus_musculus 0 379
ENSMUST00000137887 Lypla1-007 protein_coding Mus_musculus 0 300
ENSMUST00000141278 Lypla1-004 retained_intron Mus_musculus 0 291

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