C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: alcohol dehydrogenase, iron containing, 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000027044 Adhfe1-002 ENSMUSG00000025911 10090 + 1:9548055-9576901 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000027044
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000027044 72.340±38.00 43.514±11.30 5.940±0.09 40.921±8.39 1.086±0.35 27.032±7.48 115.320±16.01 31.777±22.07 4.219±1.25 10.109±1.80 10.156±2.95 2.240±2.44 1.912±0.33

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003GC CIL_0003GC_0002 CGP 1:9545408-9580673
CIL_00031D CIL_00031D_0002 CGP 1:9547948-9627143

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000276576 ADHFE1-003 nonsense_mediated_decay Homo_sapiens 0 1522
ENST00000396621 ADHFE1-005 nonsense_mediated_decay Homo_sapiens 6e-20 102
ENST00000396623 ADHFE1-001 protein_coding Homo_sapiens 0 1424
ENST00000415254 ADHFE1-004 protein_coding Homo_sapiens 0 1424
ENST00000419955 ADHFE1-009 nonsense_mediated_decay Homo_sapiens 0 606
ENST00000422166 ADHFE1-008 nonsense_mediated_decay Homo_sapiens 6e-20 102
ENST00000424777 ADHFE1-002 nonsense_mediated_decay Homo_sapiens 0 606
ENST00000426810 ADHFE1-006 nonsense_mediated_decay Homo_sapiens 0 929
ENST00000463261 ADHFE1-014 retained_intron Homo_sapiens 0 204
ENST00000466920 ADHFE1-010 retained_intron Homo_sapiens 3e-20 102
ENST00000480040 ADHFE1-015 processed_transcript Homo_sapiens 0 455
ENST00000496501 ADHFE1-007 processed_transcript Homo_sapiens 0 1349
ENST00000518781 ADHFE1-017 processed_transcript Homo_sapiens 3e-32 143

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