C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: alcohol dehydrogenase, iron containing, 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000424777 ADHFE1-002 ENSG00000147576 9606 + 8:66432498-66468809 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartLiverMuscleOvaryENST00000424777
Transcript ID Heart Liver Muscle Ovary
ENST00000424777 0.592±0.00 3.455±0.00 4.384±0.00 2.413±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003GC CIL_0003GC_0001 CGP 8:66429028-66471601
CIL_00031D CIL_00031D_0001 CGP 8:66430185-66518524

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005739 ISS mitochondrion
GO:0005759 TAS mitochondrial matrix
GO:0006103 TAS 2-oxoglutarate metabolic process
GO:0015993 IDA molecular hydrogen transport
GO:0016491 IEA oxidoreductase activity
GO:0044237 TAS cellular metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0046872 IEA metal ion binding
GO:0047988 IDA hydroxyacid-oxoacid transhydrogenase activity
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000144177 Adhfe1-001 protein_coding Mus_musculus 0 955
ENSMUST00000190654 Adhfe1-004 nonsense_mediated_decay Mus_musculus 0 948
ENSMUST00000027044 Adhfe1-002 nonsense_mediated_decay Mus_musculus 0 606
ENSMUST00000130927 Adhfe1-003 nonsense_mediated_decay Mus_musculus 2e-18 99
ENSMUST00000186467 Adhfe1-005 nonsense_mediated_decay Mus_musculus 2e-17 95

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