C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 39 (zinc transporter), member 10
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000027131 Slc39a10-001 ENSMUSG00000025986 10090 - 1:46807544-46854046 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000027131
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000027131 2.355±0.60 3.075±1.59 1.739±0.28 6.017±1.44 2.135±1.57 0.582±0.54 0.444±0.13 1.108±0.34 0.627±0.39 1.378±0.59 0.525±0.24 6.440±4.18 4.299±1.30 3.389±0.60

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0006829 IEA zinc ion transport
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane
GO:0046873 IEA metal ion transmembrane transporter activity
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000037025 slc39a10-001 protein_coding Danio_rerio 0.00000000002 77
ENST00000359634 SLC39A10-001 protein_coding Homo_sapiens 0 3609
ENST00000409086 SLC39A10-002 protein_coding Homo_sapiens 0 3456
ENST00000412905 SLC39A10-012 protein_coding Homo_sapiens 5e-36 154
ENST00000418005 SLC39A10-009 protein_coding Homo_sapiens 0 532
ENST00000430412 SLC39A10-003 nonsense_mediated_decay Homo_sapiens 0 2606
ENST00000444421 SLC39A10-006 nonsense_mediated_decay Homo_sapiens 0 460
ENST00000458054 SLC39A10-007 protein_coding Homo_sapiens 0 510
ENST00000464301 SLC39A10-013 processed_transcript Homo_sapiens 3e-16 90
ENST00000465851 SLC39A10-011 retained_intron Homo_sapiens 0 1681

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