C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 39 (zinc transporter), member 10
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000359634 SLC39A10-001 ENSG00000196950 9606 + 2:195657128-195737702 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000359634
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000359634 2.363±0.00 2.071±0.00 2.787±0.00 19.069±6.19 2.785±0.14 1.521±0.02 0.995±0.10 1.285±0.60 1.261±1.10 2.837±0.80 0.209±0.00 4.909±4.62 1.115±0.12 1.118±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00042P CIL_00042P_0002 CGP 2:195575977-196068812

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006829 IEA zinc ion transport
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0030001 IEA metal ion transport
GO:0046873 IEA metal ion transmembrane transporter activity
GO:0055085 TAS:IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000027131 Slc39a10-001 protein_coding Mus_musculus 0 3609
ENSMUST00000141226 Slc39a10-002 retained_intron Mus_musculus 0 1991
ENSMUST00000186852 Slc39a10-003 protein_coding Mus_musculus 0 616
ENSMUST00000185520 Slc39a10-004 protein_coding Mus_musculus 0 534
ENSDART00000037025 slc39a10-001 protein_coding Danio_rerio 0.00000000002 77

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