C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 39 (zinc transporter), member 10
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000037025 slc39a10-001 ENSDARG00000005823 7955 + 9:25954022-25984469 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000037025
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000037025 3.426±0.46 1.262±0.47 4.575±1.16 0.100±0.00 0.685±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00042P CIL_00042P_0001 CGP 9:25954022-26089067

Gene Ontology

GO IDEvidence TypeGO Description
GO:0016020 IEA membrane
GO:0030001 IEA metal ion transport
GO:0046873 IEA metal ion transmembrane transporter activity
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000027131 Slc39a10-001 protein_coding Mus_musculus 0.00000000002 77
ENSMUST00000070726 Slc39a6-001 protein_coding Mus_musculus 1e-26 126
ENSMUST00000154205 Slc39a6-002 protein_coding Mus_musculus 6e-27 126
ENST00000359634 SLC39A10-001 protein_coding Homo_sapiens 0.00000000002 77
ENST00000412905 SLC39A10-012 protein_coding Homo_sapiens 0.000000000004 75
ENST00000430412 SLC39A10-003 nonsense_mediated_decay Homo_sapiens 0.00000000002 77
ENST00000464301 SLC39A10-013 processed_transcript Homo_sapiens 0.0000000000002 81

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