C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chemokine (C-X-C motif) receptor 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000027372 Cxcr2-201 ENSMUSG00000026180 10090 + 1:74153989-74160610 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastColonHeartKidneyLiverLungOvaryPlacentaENSMUST00000027372
Transcript ID Adipose Breast Colon Heart Kidney Liver Lung Ovary Placenta
ENSMUST00000027372 0.903±0.01 1.082±0.21 0.050±0.01 0.540±0.06 0.189±0.00 0.772±0.95 2.440±0.41 0.160±0.01 3.252±0.86

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WL CIL_0007WL_0002 VISTA 1:73730234-74332407
CIL_0005VO CIL_0005VO_0002 CGP 1:74125541-74161246
CIL_0005VN CIL_0005VN_0002 CGP 1:74153989-74194631

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004918 TAS interleukin-8 receptor activity
GO:0004950 TAS chemokine receptor activity
GO:0005515 IPI protein binding
GO:0005886 IEA plasma membrane
GO:0006935 TAS chemotaxis
GO:0007186 IEA G-protein coupled receptor signaling pathway
GO:0016021 IEA integral component of membrane
GO:0019959 IEA interleukin-8 binding
GO:0038112 TAS interleukin-8-mediated signaling pathway
GO:0043066 IMP negative regulation of apoptotic process
GO:0070098 IEA chemokine-mediated signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000295683 CXCR1-001 protein_coding Homo_sapiens 0 614
ENST00000318507 CXCR2-001 protein_coding Homo_sapiens 0 721
ENST00000439871 CXCR2P1-002 processed_transcript Homo_sapiens 0 545
ENST00000443392 CXCR2P1-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 531

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