C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: septin 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000027495 Sept2-001 ENSMUSG00000026276 10090 + 1:93478964-93510260 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000027495
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000027495 9.012±0.81 5.769±2.09 9.483±0.06 4.631±0.47 5.100±0.00 3.718±1.07 4.479±0.42 3.301±0.79 5.181±1.80 8.396±1.03 1.834±0.22 7.056±0.00 15.558±1.40

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002JH CIL_0002JH_0002 CGP 1:93405940-93510260
CIL_0002JL CIL_0002JL_0002 CGP 1:93478964-93621976

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000145 IEA exocyst
GO:0000776 IEA kinetochore
GO:0000910 NAS cytokinesis
GO:0002036 IDA regulation of L-glutamate transport
GO:0003924 NAS GTPase activity
GO:0005515 IPI protein binding
GO:0005525 IEA GTP binding
GO:0005634 IEA nucleus
GO:0005730 IEA nucleolus
GO:0005737 ISS cytoplasm
GO:0005826 NAS actomyosin contractile ring
GO:0005876 TAS spindle microtubule
GO:0005886 IDA plasma membrane
GO:0005938 TAS cell cortex
GO:0006184 NAS GTP catabolic process
GO:0007049 IEA cell cycle
GO:0007067 IEA mitotic nuclear division
GO:0007224 IMP smoothened signaling pathway
GO:0009986 IDA cell surface
GO:0015629 TAS actin cytoskeleton
GO:0015630 TAS microtubule cytoskeleton
GO:0030234 IDA enzyme regulator activity
GO:0030496 TAS midbody
GO:0031105 IEA septin complex
GO:0031175 IEA neuron projection development
GO:0032880 IDA regulation of protein localization
GO:0032947 IDA protein complex scaffold
GO:0035869 IDA ciliary transition zone
GO:0042384 IMP cilium assembly
GO:0042802 TAS identical protein binding
GO:0042995 IDA cell projection
GO:0045202 IDA synapse
GO:0048471 IEA perinuclear region of cytoplasm
GO:0050790 IDA regulation of catalytic activity
GO:0051258 TAS protein polymerization
GO:0060170 IDA ciliary membrane
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000360051 SEPT2-001 protein_coding Homo_sapiens 0 1413
ENST00000366210 SEPT2-041 processed_transcript Homo_sapiens 0 424
ENST00000391971 SEPT2-007 protein_coding Homo_sapiens 0 1413
ENST00000391973 SEPT2-002 protein_coding Homo_sapiens 0 1413
ENST00000401990 SEPT2-004 protein_coding Homo_sapiens 0 1112
ENST00000402092 SEPT2-008 protein_coding Homo_sapiens 0 1413
ENST00000407017 SEPT2-014 protein_coding Homo_sapiens 0 405
ENST00000407971 SEPT2-005 protein_coding Homo_sapiens 0 1391
ENST00000411484 SEPT2-023 protein_coding Homo_sapiens 0 466
ENST00000420786 SEPT2-037 protein_coding Homo_sapiens 0 230
ENST00000421717 SEPT2-046 protein_coding Homo_sapiens 0 211
ENST00000425899 SEPT2-033 nonsense_mediated_decay Homo_sapiens 0 309
ENST00000428282 SEPT2-009 protein_coding Homo_sapiens 0 835
ENST00000428524 SEPT2-013 protein_coding Homo_sapiens 0 226
ENST00000434955 SEPT2-026 protein_coding Homo_sapiens 0 399
ENST00000436795 SEPT2-021 protein_coding Homo_sapiens 0 536
ENST00000437066 SEPT2-034 protein_coding Homo_sapiens 0 479
ENST00000441533 SEPT2-031 protein_coding Homo_sapiens 0 300
ENST00000443492 SEPT2-040 protein_coding Homo_sapiens 0 569
ENST00000445030 SEPT2-012 protein_coding Homo_sapiens 0 303
ENST00000449239 SEPT2-039 protein_coding Homo_sapiens 0 632
ENST00000457335 SEPT2-022 nonsense_mediated_decay Homo_sapiens 0 481
ENST00000467971 SEPT2-032 retained_intron Homo_sapiens 0 582
ENST00000469434 SEPT2-016 retained_intron Homo_sapiens 0 407
ENST00000473479 SEPT2-029 retained_intron Homo_sapiens 0 353
ENST00000475474 SEPT2-019 retained_intron Homo_sapiens 0 422
ENST00000482304 SEPT2-018 retained_intron Homo_sapiens 0 303
ENST00000616972 SEPT2-201 protein_coding Homo_sapiens 0 1413

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