C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: plexin A2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000367033 PLXNA2-001 ENSG00000076356 9606 - 1:208022242-208244320 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000367033
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000367033 4.327±0.00 2.633±0.00 3.839±1.85 1.439±0.00 2.308±0.22 1.348±1.13 1.191±0.70 1.172±0.11 5.423±3.84 1.158±0.61 5.008±3.55 4.713±1.10 0.711±0.46

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001756 IEA somitogenesis
GO:0002116 TAS semaphorin receptor complex
GO:0004872 IEA receptor activity
GO:0005515 IPI:IEA protein binding
GO:0005622 IEA intracellular
GO:0005886 TAS plasma membrane
GO:0005887 ISS integral component of plasma membrane
GO:0007165 IEA signal transduction
GO:0007166 IEA cell surface receptor signaling pathway
GO:0007275 IEA multicellular organismal development
GO:0007411 TAS axon guidance
GO:0016020 IEA membrane
GO:0017154 ISS semaphorin receptor activity
GO:0021915 IEA neural tube development
GO:0021935 IEA cerebellar granule cell precursor tangential migration
GO:0030334 ISS regulation of cell migration
GO:0051642 IEA centrosome localization
GO:0060037 IEA pharyngeal system development
GO:0060174 IEA limb bud formation
GO:0071526 ISS semaphorin-plexin signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000027952 Plxna2-001 protein_coding Mus_musculus 0 7169
ENSMUST00000115096 Plxna4-001 protein_coding Mus_musculus 0 1507
ENSMUST00000124785 Plxna2-003 retained_intron Mus_musculus 0 1443
ENSMUST00000049845 Plxna1-201 protein_coding Mus_musculus 0 1430
ENSMUST00000163139 Plxna1-202 protein_coding Mus_musculus 0 1430
ENSMUST00000004326 Plxna3-001 protein_coding Mus_musculus 0 1077
ENSDART00000086317 plxna1-201 protein_coding Danio_rerio 0 1044
ENSMUST00000154062 Plxna3-002 retained_intron Mus_musculus 0 994
ENSMUST00000125381 Plxna2-002 processed_transcript Mus_musculus 0 388
ENSMUST00000135664 Plxna2-004 nonsense_mediated_decay Mus_musculus 0 265

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