C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: speckle-type POZ protein-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000028110 Spopl-005 ENSMUSG00000026771 10090 - 2:23510672-23572078 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000028110
Transcript ID Adipose Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000028110 1.215±0.21 1.056±0.00 0.681±0.15 0.763±0.29 0.853±0.15 1.067±0.20 1.454±0.75 1.193±0.12 1.419±0.00 1.092±0.67 2.132±0.29 1.727±0.48

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000QJ CIL_0000QJ_0002 CGP 2:23321246-23572106
CIL_0000QI CIL_0000QI_0002 CGP 2:23506220-24049394

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000280098 SPOPL-001 protein_coding Homo_sapiens 0 1417
ENST00000420679 SPOPL-002 nonsense_mediated_decay Homo_sapiens 0 1733
ENST00000430968 SPOPL-003 nonsense_mediated_decay Homo_sapiens 2e-37 159
ENST00000467775 SPOPL-004 retained_intron Homo_sapiens 0 315
ENST00000504736 RP11-468N14.6-001 processed_pseudogene Homo_sapiens 0 586
ENST00000506559 RP13-644M16.1-001 processed_pseudogene Homo_sapiens 0 765
ENST00000509604 RP11-468N14.11-001 processed_pseudogene Homo_sapiens 0 809

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