C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: speckle-type POZ protein-like
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000026771 Spopl 10090 - 2:23506220-23572106 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000028110 Spopl-005 23510672-23572078 processed_transcript
  ENSMUST00000123843 Spopl-003 23543243-23572106 processed_transcript
  ENSMUST00000132484 Spopl-001 23506220-23572104 protein_coding
  ENSMUST00000132827 Spopl-002 23511270-23571978 processed_transcript
  ENSMUST00000136290 Spopl-004 23517803-23537500 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000028110ENSMUST00000123843ENSMUST00000132484ENSMUST00000132827
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000028110 1.215±0.21 N/A 1.056±0.00 N/A 0.681±0.15 0.763±0.29 0.853±0.15 1.067±0.20 1.454±0.75 1.193±0.12 1.419±0.00 1.092±0.67 2.132±0.29 1.727±0.48
ENSMUST00000123843 3.344±0.00 1.167±0.36 N/A N/A 1.371±0.42 1.660±0.51 N/A 1.757±0.00 1.492±0.00 5.389±0.00 N/A 1.676±0.78 N/A N/A
ENSMUST00000132484 0.706±0.39 0.970±0.10 1.292±0.27 1.775±0.84 0.682±0.43 0.671±0.13 0.407±0.00 0.400±0.09 1.403±0.79 1.886±0.25 1.477±0.50 0.901±0.28 0.780±0.35 0.391±0.03
ENSMUST00000132827 N/A 1.270±0.09 N/A N/A 1.088±0.00 0.922±0.00 N/A N/A N/A N/A N/A 2.040±0.57 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000QJ CIL_0000QJ_0002 CGP 2:23321246-23572106
CIL_0000QI CIL_0000QI_0002 CGP 2:23506220-24049394

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005634 IEA nucleus
GO:0016567 IEA protein ubiquitination
GO:0031397 ISS negative regulation of protein ubiquitination
GO:0031463 ISS Cul3-RING ubiquitin ligase complex
GO:0043161 ISS proteasome-mediated ubiquitin-dependent protein catabolic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000003974 spoplb speckle-type POZ protein-like b protein_coding Danio_rerio
ENSDARG00000010563 spopla speckle-type POZ protein-like a protein_coding Danio_rerio
ENSG00000144228 SPOPL speckle-type POZ protein-like protein_coding Homo_sapiens

Loading