C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: serologically defined colon cancer antigen 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000028293 Sdccag3-001 ENSMUSG00000026927 10090 - 2:26382802-26389304 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000028293
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000028293 11.912±2.55 21.640±2.69 6.398±0.00 14.382±5.94 22.541±5.37 5.907±1.71 22.320±0.96 11.151±5.67 15.236±3.26 1.847±0.42 16.813±4.63 8.368±2.10

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002E3 CIL_0002E3_0003 CGP 2:26362765-26389316
CIL_00034J CIL_00034J_0002 CGP 2:26382802-26397122

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005737 IEA cytoplasm
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000326105 SDCCAG3P2-001 processed_pseudogene Homo_sapiens 0 736

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