C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: smoothelin-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000028471 Smtnl1-001 ENSMUSG00000027077 10090 - 2:84811176-84822652 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000028471
Transcript ID Adipose Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000028471 0.019±0.00 3.113±2.06 0.036±0.00 1.411±0.10 0.144±0.09 1.445±0.98 30.587±7.05 0.058±0.02 0.075±0.03 4.758±4.06

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004864 ISO protein phosphatase inhibitor activity
GO:0005515 IPI protein binding
GO:0005516 IEA calmodulin binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0008157 IPI protein phosphatase 1 binding
GO:0014823 IMP response to activity
GO:0017020 ISO myosin phosphatase regulator activity
GO:0018105 IDA peptidyl-serine phosphorylation
GO:0031430 IDA M band
GO:0031674 IDA I band
GO:0042493 IDA response to drug
GO:0043086 ISO negative regulation of catalytic activity
GO:0043292 IDA contractile fiber
GO:0045907 IMP positive regulation of vasoconstriction
GO:0045908 IMP negative regulation of vasodilation
GO:0048644 IMP muscle organ morphogenesis
GO:0050790 ISO regulation of catalytic activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000399154 SMTNL1-201 protein_coding Homo_sapiens 0 837
ENST00000527972 SMTNL1-001 protein_coding Homo_sapiens 0 732

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