C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: U box domain containing 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000028761 Ubox5-001 ENSMUSG00000027300 10090 - 2:130590002-130630038 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000028761
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000028761 2.564±0.87 3.112±0.75 1.617±0.22 1.253±0.19 2.853±0.50 2.426±0.72 1.578±0.32 2.556±0.55 1.666±0.85 1.802±0.73 1.194±0.00 2.885±1.28 1.018±0.20 0.746±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007SG CIL_0007SG_0002 VISTA 2:130051805-130652389
CIL_000066 CIL_000066_0002 CGP 2:130580620-130630038
CIL_000067 CIL_000067_0002 CGP 2:130590002-130630038

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000209 IDA protein polyubiquitination
GO:0004842 IDA ubiquitin-protein transferase activity
GO:0005634 IDA nucleus
GO:0008270 IEA zinc ion binding
GO:0016604 ISS nuclear body
GO:0031625 IPI ubiquitin protein ligase binding
GO:0034450 IDA ubiquitin-ubiquitin ligase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000217173 UBOX5-001 protein_coding Homo_sapiens 0 1581
ENST00000348031 UBOX5-002 protein_coding Homo_sapiens 0 1242
ENST00000449731 UBOX5-003 protein_coding Homo_sapiens 0 375

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