C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ChaC, cation transport regulator 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000028780 Chac1-001 ENSMUSG00000027313 10090 + 2:119351229-119354381 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000028780
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000028780 3.385±1.53 7.631±1.55 0.650±0.08 2.076±0.08 6.371±4.85 1.734±0.27 2.367±0.66 0.813±0.09 1.485±0.80 4.335±0.15 30.118±13.00 2.198±1.39 0.526±0.35 0.182±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005IN CIL_0005IN_0003 CGP 2:119325784-119354381
CIL_0005IM CIL_0005IM_0003 CGP 2:119351229-119477687

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005112 IDA Notch binding
GO:0005515 IEA protein binding
GO:0005802 IDA trans-Golgi network
GO:0005829 ISS cytosol
GO:0006986 IEA response to unfolded protein
GO:0007219 IEA Notch signaling pathway
GO:0010955 ISS negative regulation of protein processing
GO:0022008 IMP neurogenesis
GO:0045746 ISS negative regulation of Notch signaling pathway
GO:0070059 ISS intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000444189 CHAC1-003 protein_coding Homo_sapiens 0 241
ENST00000446533 CHAC1-001 protein_coding Homo_sapiens 0 920
ENST00000487220 CHAC1-002 protein_coding Homo_sapiens 0 582
ENST00000617768 CHAC1-201 protein_coding Homo_sapiens 0 920
ENST00000617961 CHAC1-004 protein_coding Homo_sapiens 0 878

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