C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Z-DNA binding protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000029018 Zbp1-001 ENSMUSG00000027514 10090 - 2:173206612-173218923 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000029018
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000029018 1.314±0.34 1.510±0.64 0.633±0.08 0.059±0.04 5.631±1.31 4.333±0.65 0.157±0.01 0.912±0.44 1.631±1.16 1.136±0.19 0.087±0.08 1.107±0.40 0.403±0.16 0.139±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008HJ CIL_0008HJ_0002 VISTA 2:172734798-173336840
CIL_0008BA CIL_0008BA_0002 VISTA 2:172748983-173356071
CIL_0005K4 CIL_0005K4_0002 CGP 2:173153048-173218923
CIL_0005K6 CIL_0005K6_0002 CGP 2:173206612-173276533

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IDA DNA binding
GO:0003692 IDA left-handed Z-DNA binding
GO:0003723 IEA RNA binding
GO:0003726 IEA double-stranded RNA adenosine deaminase activity
GO:0005515 IPI protein binding
GO:0005634 ISO nucleus
GO:0005737 ISO cytoplasm
GO:0005829 IEA cytosol
GO:0008152 IEA metabolic process
GO:0060340 IMP positive regulation of type I interferon-mediated signaling pathway

Homologs

No Homologs available.

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