C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005K4_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000124253-ENSG00000124256 CGP 9606 20:57561080-57620576
GeneTranscriptPositionBiotype
ENSG00000124253 (PCK1)
phosphoenolpyruvate carboxykinase 1 (soluble) 		ENST00000319441 (PCK1-001) 57561080-57568112 protein_coding
ENST00000467047 (PCK1-002) 57561080-57566367 retained_intron
ENST00000470051 (PCK1-005) 57562834-57563591 retained_intron
ENST00000475833 (PCK1-003) 57561103-57562307 retained_intron
ENST00000485958 (PCK1-006) 57564084-57565392 retained_intron
ENST00000498194 (PCK1-004) 57562348-57563607 retained_intron
ENSG00000124256 (ZBP1)
Z-DNA binding protein 1 		ENST00000371173 (ZBP1-001) 57603846-57620473 protein_coding
ENST00000395822 (ZBP1-003) 57603846-57620576 protein_coding
ENST00000432548 (ZBP1-006) 57615124-57620490 processed_transcript
ENST00000453793 (ZBP1-005) 57607061-57610265 protein_coding
ENST00000461547 (ZBP1-004) 57604055-57618081 retained_intron
ENST00000480037 (ZBP1-002) 57612891-57620427 retained_intron
ENST00000538947 (ZBP1-009) 57615026-57620478 processed_transcript
ENST00000541799 (ZBP1-008) 57612891-57620394 protein_coding
ENST00000546110 (ZBP1-007) 57614904-57620480 processed_transcript

Homo sapiens Ensembl (GRCh38)

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CIL_0005K4_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000027513-ENSMUSG00000027514 CGP 10090 2:173153048-173218923
GeneTranscriptPositionBiotype
ENSMUSG00000027513 (Pck1)
phosphoenolpyruvate carboxykinase 1, cytosolic 		ENSMUST00000029017 (Pck1-001) 173153048-173159273 protein_coding
ENSMUST00000136885 (Pck1-003) 173153082-173159271 retained_intron
ENSMUST00000150629 (Pck1-004) 173153073-173154809 processed_transcript
ENSMUST00000151269 (Pck1-002) 173153073-173154459 retained_intron
ENSMUSG00000027514 (Zbp1)
Z-DNA binding protein 1 		ENSMUST00000029018 (Zbp1-001) 173206612-173218923 protein_coding
ENSMUST00000109116 (Zbp1-002) 173213735-173218910 protein_coding
ENSMUST00000146802 (Zbp1-003) 173206615-173218897 retained_intron

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005K4_0001ENSG00000124253ENST00000319441ENST00000467047ENST00000470051ENST00000475833ENST00000485958ENST00000498194ENSG00000124256ENST00000371173ENST00000395822ENST00000432548ENST00000453793ENST00000461547ENST00000480037ENST00000538947ENST00000541799ENST00000546110CIL_0005K4_0002ENSMUSG00000027513ENSMUST00000029017ENSMUST00000136885ENSMUST00000150629ENSMUST00000151269ENSMUSG00000027514ENSMUST00000029018ENSMUST00000109116ENSMUST00000146802
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005K4_0001ENSG00000124253ENST00000319441ENST00000467047ENST00000470051ENST00000475833ENST00000485958ENST00000498194ENSG00000124256ENST00000371173ENST00000395822ENST00000432548ENST00000453793ENST00000461547ENST00000480037ENST00000538947ENST00000541799ENST00000546110CIL_0005K4_0002ENSMUSG00000027513ENSMUST00000029017ENSMUST00000136885ENSMUSG00000027514ENSMUST00000029018ENSMUST00000109116ENSMUST00000146802
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000124253 ENST00000319441 N/A 0.097±0.00 27.480±0.00 0.084±0.01 2.165±0.00 10.707±0.00 0.189±0.00 26.186±0.00 2.644±0.00 0.326±0.16 0.197±0.09 0.270±0.15 0.107±0.06 0.271±0.02
ENST00000467047 N/A N/A 9.349±0.00 N/A 0.480±0.00 6.421±0.00 0.110±0.09 8.731±0.00 1.058±0.00 0.176±0.00 N/A 0.135±0.00 N/A N/A
ENST00000470051 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.150±0.00 N/A N/A
ENST00000475833 N/A N/A N/A N/A N/A N/A N/A N/A 2.553±0.00 0.470±0.00 N/A N/A N/A N/A
ENST00000485958 N/A N/A N/A N/A N/A N/A 0.314±0.00 N/A N/A N/A 0.178±0.00 0.413±0.00 0.196±0.00 N/A
ENST00000498194 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.052±0.00 N/A
ENSG00000124256 ENST00000371173 N/A 0.529±0.00 N/A N/A N/A N/A N/A N/A N/A 0.536±0.29 N/A 0.203±0.11 0.154±0.02 N/A
ENST00000395822 0.039±0.00 N/A N/A 0.042±0.01 0.810±0.00 0.235±0.11 0.045±0.00 N/A 0.132±0.00 N/A N/A N/A 0.179±0.02 0.125±0.00
ENST00000432548 N/A N/A N/A N/A N/A N/A N/A 0.354±0.00 N/A N/A N/A N/A N/A N/A
ENST00000453793 N/A N/A N/A N/A N/A N/A N/A N/A 0.111±0.00 N/A N/A N/A N/A 0.396±0.00
ENST00000461547 N/A N/A N/A N/A N/A 0.159±0.00 0.006±0.00 N/A N/A N/A N/A 0.030±0.00 0.035±0.00 N/A
ENST00000480037 N/A N/A N/A N/A 0.175±0.00 0.520±0.00 N/A N/A N/A N/A N/A 0.491±0.43 0.070±0.00 N/A
ENST00000538947 N/A N/A N/A N/A 1.332±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000541799 N/A 1.348±0.00 N/A N/A 1.296±0.00 0.487±0.00 N/A N/A 0.142±0.00 0.762±0.05 N/A 0.364±0.27 N/A 0.079±0.00
ENST00000546110 N/A N/A N/A N/A N/A N/A N/A N/A 0.360±0.00 0.953±0.32 N/A N/A 0.446±0.00 0.068±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027513 ENSMUST00000029017 117.640±70.66 71.693±25.03 2.281±0.05 0.008±0.01 54.968±15.10 35.908±7.91 10.513±6.32 369.938±44.50 115.043±133.22 6.640±2.44 1.264±1.26 9.022±12.01 1.022±1.79 0.135±0.04
ENSMUST00000136885 N/A N/A 0.492±0.00 N/A N/A N/A N/A N/A 0.145±0.15 N/A 0.604±0.00 N/A N/A 0.063±0.00
ENSMUST00000150629 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151269 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000027514 ENSMUST00000029018 1.314±0.34 1.510±0.64 0.633±0.08 0.059±0.04 5.631±1.31 4.333±0.65 0.157±0.01 0.912±0.44 1.631±1.16 1.136±0.19 0.087±0.08 1.107±0.40 0.403±0.16 0.139±0.00
ENSMUST00000109116 2.897±0.31 0.974±0.08 3.024±0.06 0.044±0.00 N/A 5.384±1.86 0.595±0.00 1.091±0.33 2.566±1.72 1.434±0.23 0.152±0.03 2.256±0.84 0.777±0.44 N/A
ENSMUST00000146802 1.344±0.38 0.779±0.37 0.644±0.07 0.018±0.01 3.532±0.83 1.956±0.84 0.132±0.06 0.560±0.31 0.702±0.61 0.799±0.00 0.044±0.03 1.029±0.80 0.100±0.05 0.068±0.00

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