C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAB22A, member RAS oncogene family
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000029024 Rab22a-001 ENSMUSG00000027519 10090 + 2:173659760-173707343 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000029024
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000029024 6.842±1.06 6.709±0.84 7.982±0.69 4.285±0.22 4.647±0.64 7.140±0.45 4.672±0.48 7.233±0.32 3.235±0.41 7.716±0.33 6.716±0.56 5.954±0.89 10.991±3.87 5.066±0.24

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00028J CIL_00028J_0002 CGP 2:173568666-173707343

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003924 IDA GTPase activity
GO:0005515 IPI protein binding
GO:0005525 IDA GTP binding
GO:0005769 IEA early endosome
GO:0005886 IEA plasma membrane
GO:0006184 IDA GTP catabolic process
GO:0006897 IEA endocytosis
GO:0007032 IEA endosome organization
GO:0007264 IEA small GTPase mediated signal transduction
GO:0015031 IEA protein transport
GO:0015629 IDA actin cytoskeleton
GO:0019003 ISS GDP binding
GO:0042995 IEA cell projection
GO:0045335 ISS phagocytic vesicle
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000244040 RAB22A-001 protein_coding Homo_sapiens 0 970
ENST00000488949 RAB22A-002 processed_transcript Homo_sapiens 0 433

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