C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | hnRNP-associated with lethal yellow | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000029120  |
Raly-003 |
ENSMUSG00000027593 |
10090 | + |
2:154791133-154867244  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00098F | CIL_00098F_0002 | VISTA | 2:154750090-155352094 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000166 | IEA | nucleotide binding |
| GO:0003676 | IEA | nucleic acid binding |
| GO:0005515 | IEA | protein binding |
| GO:0005634 | IEA | nucleus |
| GO:0006397 | IEA | mRNA processing |
| GO:0008380 | IEA | RNA splicing |
| GO:0044822 | IEA | poly(A) RNA binding |
| GO:0071013 | IEA | catalytic step 2 spliceosome |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000246194
|
RALY-002 | protein_coding | Homo_sapiens | 0 | 1315 |
|
ENST00000333552
|
RALY-005 | protein_coding | Homo_sapiens | 0 | 399 |
|
ENST00000375114
|
RALY-001 | protein_coding | Homo_sapiens | 0 | 640 |
|
ENST00000413297
|
RALY-003 | protein_coding | Homo_sapiens | 0 | 370 |
|
ENST00000442805
|
RALY-007 | protein_coding | Homo_sapiens | 0 | 536 |
|
ENST00000448364
|
RALY-004 | protein_coding | Homo_sapiens | 0 | 684 |
|
ENST00000488227
|
RALY-009 | processed_transcript | Homo_sapiens | 0 | 268 |
|
ENST00000493399
|
RALY-006 | processed_transcript | Homo_sapiens | 0 | 355 |
