C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: methylcrotonoyl-Coenzyme A carboxylase 1 (alpha)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000029259 Mccc1-001 ENSMUSG00000027709 10090 - 3:35959839-36000678 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000029259
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000029259 19.111±4.61 7.116±0.54 5.193±2.09 9.919±2.80 2.000±0.65 14.046±1.26 22.710±5.18 7.135±1.85 1.667±0.08 10.470±1.03 5.935±5.58 5.379±2.11 1.660±0.25

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00090H CIL_00090H_0002 VISTA 3:35858852-36462657
CIL_0005FZ CIL_0005FZ_0002 CGP 3:35892105-36000678

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004075 IEA biotin carboxylase activity
GO:0004485 ISS methylcrotonoyl-CoA carboxylase activity
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005739 IDA mitochondrion
GO:0005743 IDA mitochondrial inner membrane
GO:0006552 IEA leucine catabolic process
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000265594 MCCC1-001 protein_coding Homo_sapiens 0 2067
ENST00000464601 MCCC1-012 retained_intron Homo_sapiens 0 339
ENST00000466650 MCCC1-007 nonsense_mediated_decay Homo_sapiens 3e-26 122
ENST00000473955 MCCC1-013 retained_intron Homo_sapiens 0 191
ENST00000476176 MCCC1-003 protein_coding Homo_sapiens 0 1609
ENST00000486226 MCCC1-010 nonsense_mediated_decay Homo_sapiens 0 217
ENST00000487634 MCCC1-009 nonsense_mediated_decay Homo_sapiens 0 392
ENST00000490284 MCCC1-008 nonsense_mediated_decay Homo_sapiens 0 438
ENST00000492597 MCCC1-002 protein_coding Homo_sapiens 0 1853
ENST00000495767 MCCC1-004 nonsense_mediated_decay Homo_sapiens 0 1380
ENST00000497830 MCCC1-005 nonsense_mediated_decay Homo_sapiens 0 1574
ENST00000497959 MCCC1-006 nonsense_mediated_decay Homo_sapiens 0 1461
ENST00000539926 MCCC1-201 protein_coding Homo_sapiens 0 1572
ENST00000610757 MCCC1-202 protein_coding Homo_sapiens 0 1572

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