C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane 4 superfamily member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000029376 Tm4sf1-201 ENSMUSG00000027800 10090 - 3:57287064-57301919 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000029376
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000029376 22.914±10.38 3.703±2.41 14.314±5.21 1.230±0.27 17.100±8.02 7.055±1.52 14.030±7.71 23.390±3.08 3.055±1.80 71.199±3.18 3.154±1.05 18.448±5.19 2.784±1.91 0.684±0.25

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002R2 CIL_0002R2_0002 CGP 3:57285611-57441677

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000305366 TM4SF1-001 protein_coding Homo_sapiens 0 654
ENST00000472441 TM4SF1-003 protein_coding Homo_sapiens 0 318
ENST00000493298 TM4SF1-005 nonsense_mediated_decay Homo_sapiens 0 209
ENST00000622124 TM4SF1-201 protein_coding Homo_sapiens 0 597

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