C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002R2_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000169908-ENSG00000169903 CGP 9606 3:149369022-149503281
GeneTranscriptPositionBiotype
ENSG00000169903 (TM4SF4)
transmembrane 4 L six family member 4 		ENST00000305354 (TM4SF4-001) 149473974-149503281 protein_coding
ENST00000463068 (TM4SF4-003) 149475784-149498911 retained_intron
ENST00000465758 (TM4SF4-002) 149474699-149487687 protein_coding
ENSG00000239408 (RP11-278L15.4)
 ENST00000490852 (RP11-278L15.4-001) 149464839-149465201 processed_pseudogene
ENSG00000240246 (RP11-167H9.1)
 ENST00000469993 (RP11-167H9.1-001) 149433044-149433274 processed_pseudogene
ENSG00000241929 (RP11-278L15.3)
 ENST00000461814 (RP11-278L15.3-001) 149462182-149464830 processed_pseudogene
ENSG00000244503 (RP11-278L15.6)
 ENST00000492880 (RP11-278L15.6-001) 149494660-149495995 processed_pseudogene
CIL_0002R2_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000027800-ENSMUSG00000027801 CGP 10090 3:57285611-57441677
GeneTranscriptPositionBiotype
ENSMUSG00000027800 (Tm4sf1)
transmembrane 4 superfamily member 1 		ENSMUST00000029376 (Tm4sf1-201) 57287064-57301919 protein_coding
ENSMUST00000171384 (Tm4sf1-202) 57285611-57294889 protein_coding
ENSMUSG00000027801 (Tm4sf4)
transmembrane 4 superfamily member 4 		ENSMUST00000029377 (Tm4sf4-001) 57425314-57441677 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002R2_0001ENSG00000169903ENST00000305354ENST00000463068ENST00000465758ENSG00000239408ENST00000490852ENSG00000240246ENST00000469993ENSG00000241929ENST00000461814ENSG00000244503ENST00000492880CIL_0002R2_0002ENSMUSG00000027800ENSMUST00000029376ENSMUST00000171384ENSMUSG00000027801ENSMUST00000029377
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002R2_0001ENSG00000169903ENST00000305354ENST00000463068ENST00000465758ENSG00000239408ENST00000490852ENSG00000240246ENST00000469993ENSG00000241929ENST00000461814ENSG00000244503ENST00000492880CIL_0002R2_0002ENSMUSG00000027800ENSMUST00000029376ENSMUST00000171384ENSMUSG00000027801ENSMUST00000029377
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000169903 ENST00000305354 0.012±0.00 0.033±0.00 N/A N/A 0.010±0.00 0.103±0.00 N/A 39.655±0.00 0.052±0.00 N/A N/A 0.074±0.02 0.034±0.00 0.067±0.03
ENST00000463068 0.072±0.00 0.100±0.00 N/A N/A N/A 2.828±0.00 N/A 0.278±0.00 41.605±0.00 0.288±0.00 N/A 0.063±0.00 0.143±0.00 N/A
ENST00000465758 N/A 0.132±0.00 N/A N/A N/A 3.188±0.00 N/A N/A 59.836±0.00 N/A N/A 0.058±0.00 0.043±0.00 N/A
ENSG00000239408 ENST00000490852 N/A N/A N/A N/A 0.068±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.135±0.00
ENSG00000240246 ENST00000469993 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.160±0.00
ENSG00000241929 ENST00000461814 N/A 0.028±0.00 N/A N/A 0.142±0.00 N/A N/A N/A N/A 0.090±0.00 N/A N/A N/A N/A
ENSG00000244503 ENST00000492880 0.010±0.00 0.041±0.00 N/A 0.031±0.00 0.129±0.08 0.019±0.00 0.056±0.00 0.262±0.24 0.241±0.00 0.019±0.00 N/A 0.009±0.00 N/A 0.029±0.01
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027800 ENSMUST00000029376 22.914±10.38 3.703±2.41 14.314±5.21 1.230±0.27 17.100±8.02 7.055±1.52 14.030±7.71 23.390±3.08 3.055±1.80 71.199±3.18 3.154±1.05 18.448±5.19 2.784±1.91 0.684±0.25
ENSMUST00000171384 6.275±0.58 5.629±1.75 4.117±0.47 0.214±0.04 7.861±0.94 2.320±0.49 6.342±0.88 7.227±1.42 0.611±0.25 25.563±1.35 1.524±0.34 4.382±2.06 0.617±0.21 0.171±0.08
ENSMUSG00000027801 ENSMUST00000029377 0.073±0.04 0.368±0.16 0.094±0.02 0.015±0.00 0.298±0.21 3.280±0.83 0.072±0.04 0.305±0.12 60.737±33.40 0.069±0.02 N/A 0.320±0.18 0.124±0.03 1.215±0.86

Loading