C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transmembrane 4 superfamily member 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000027800 Tm4sf1 10090 - 3:57285611-57301919 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000029376 Tm4sf1-201 57287064-57301919 protein_coding
  ENSMUST00000171384 Tm4sf1-202 57285611-57294889 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000029376ENSMUST00000171384
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000029376 22.914±10.38 3.703±2.41 14.314±5.21 1.230±0.27 17.100±8.02 7.055±1.52 14.030±7.71 23.390±3.08 3.055±1.80 71.199±3.18 3.154±1.05 18.448±5.19 2.784±1.91 0.684±0.25
ENSMUST00000171384 6.275±0.58 5.629±1.75 4.117±0.47 0.214±0.04 7.861±0.94 2.320±0.49 6.342±0.88 7.227±1.42 0.611±0.25 25.563±1.35 1.524±0.34 4.382±2.06 0.617±0.21 0.171±0.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002R2 CIL_0002R2_0002 CGP 3:57285611-57441677

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005887 IEA integral component of plasma membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000060668 tm4sf18 transmembrane 4 L six family member 18 protein_coding Danio_rerio
ENSG00000169908 TM4SF1 transmembrane 4 L six family member 1 protein_coding Homo_sapiens

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