C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 33 (acetyl-CoA transporter), member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000029402 Slc33a1-001 ENSMUSG00000027822 10090 - 3:63942330-63964768 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000029402
Transcript ID Adipose Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000029402 1.081±0.04 5.707±0.00 2.635±1.44 1.119±0.00 0.960±0.13 5.820±1.38 4.095±1.70 1.142±0.06 1.587±0.24 6.681±3.68 4.081±2.21 0.377±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004SM CIL_0004SM_0003 CGP 3:63914684-63964768
CIL_0004SN CIL_0004SN_0003 CGP 3:63933507-64022579

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005783 IEA endoplasmic reticulum
GO:0008521 IEA acetyl-CoA transporter activity
GO:0015876 IEA acetyl-CoA transport
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000359479 SLC33A1-001 protein_coding Homo_sapiens 0 2047
ENST00000392845 SLC33A1-002 protein_coding Homo_sapiens 0 2555
ENST00000468581 SLC33A1-005 nonsense_mediated_decay Homo_sapiens 0 811
ENST00000475842 SLC33A1-003 protein_coding Homo_sapiens 0 946
ENST00000496772 SLC33A1-006 protein_coding Homo_sapiens 0 512
ENST00000521474 RP11-59O2.1-001 processed_pseudogene Homo_sapiens 0 237

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