C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000029404 Ppfia2-201 ENSMUSG00000053825 10090 + 10:106470310-106933467 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000029404
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000029404 0.121±0.03 0.308±0.09 0.043±0.01 14.204±6.79 0.028±0.01 0.052±0.04 0.066±0.01 0.052±0.01 0.026±0.02 0.056±0.05 0.030±0.01 0.078±0.06 0.032±0.03 0.635±0.23

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0007160 IEA cell-matrix adhesion
GO:0007165 IEA signal transduction
GO:0008150 ND biological_process
GO:0032403 IDA protein complex binding
GO:0045202 IDA synapse
GO:0048786 IEA presynaptic active zone
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000333447 PPFIA2-201 protein_coding Homo_sapiens 0 4859
ENST00000407050 PPFIA2-006 protein_coding Homo_sapiens 0 3314
ENST00000443686 PPFIA2-008 protein_coding Homo_sapiens 0 3993
ENST00000541017 PPFIA2-202 protein_coding Homo_sapiens 0 1997
ENST00000541570 PPFIA2-010 protein_coding Homo_sapiens 0 2085
ENST00000545296 PPFIA2-007 processed_transcript Homo_sapiens 0 1086
ENST00000547623 PPFIA2-014 protein_coding Homo_sapiens 0 628
ENST00000548058 ACSS3-001 protein_coding Homo_sapiens 0 833
ENST00000548453 PPFIA2-015 processed_transcript Homo_sapiens 0 484
ENST00000548586 PPFIA2-004 protein_coding Homo_sapiens 0 5190
ENST00000548670 PPFIA2-019 protein_coding Homo_sapiens 0 529
ENST00000548790 PPFIA2-017 protein_coding Homo_sapiens 0 741
ENST00000549325 PPFIA2-003 protein_coding Homo_sapiens 0 4427
ENST00000549344 PPFIA2-021 retained_intron Homo_sapiens 0 372
ENST00000549396 PPFIA2-001 protein_coding Homo_sapiens 0 6010
ENST00000549917 PPFIA2-020 processed_transcript Homo_sapiens 0 658
ENST00000550018 PPFIA2-023 protein_coding Homo_sapiens 0 366
ENST00000550359 PPFIA2-009 protein_coding Homo_sapiens 0 4754
ENST00000550584 PPFIA2-002 protein_coding Homo_sapiens 0 5228
ENST00000550798 PPFIA2-013 retained_intron Homo_sapiens 0 556
ENST00000551147 PPFIA2-022 protein_coding Homo_sapiens 0 244
ENST00000551442 PPFIA2-012 protein_coding Homo_sapiens 0 470
ENST00000551461 PPFIA2-011 nonsense_mediated_decay Homo_sapiens 0 1474
ENST00000552020 PPFIA2-016 retained_intron Homo_sapiens 0 577
ENST00000552948 PPFIA2-005 protein_coding Homo_sapiens 0 4010
ENST00000553058 PPFIA2-018 protein_coding Homo_sapiens 0 1061

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