C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000029925 Ndufaf4-001 ENSMUSG00000028261 10090 + 4:24898083-24905001 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000029925
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000029925 0.288±0.03 1.040±0.09 1.427±0.11 0.544±0.01 0.446±0.00 1.420±0.18 1.649±0.52 1.163±0.39 0.331±0.00 1.373±0.09 0.873±0.57 0.250±0.00 0.158±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00096U CIL_00096U_0002 VISTA 4:24369206-24970330
CIL_00024H CIL_00024H_0002 CGP 4:24898083-25009233

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005516 IEA calmodulin binding
GO:0005739 IDA mitochondrion
GO:0010257 IMP NADH dehydrogenase complex assembly
GO:0031966 IEA mitochondrial membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000456468 NDUFAF4P3-001 processed_pseudogene Homo_sapiens 0 372
ENST00000559425 NDUFAF4P1-001 processed_pseudogene Homo_sapiens 0 370

Loading