C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00096U_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs676 VISTA 9606 6:96796735-97397883
GeneTranscriptPositionBiotype
ENSG00000112218 (GPR63)
G protein-coupled receptor 63 		ENST00000229955 (GPR63-001) 96794126-96837463 protein_coding
ENSG00000123545 (NDUFAF4)
NADH dehydrogenase (ubiquinone) complex I, assembly factor 4 		ENST00000316149 (NDUFAF4-001) 96889313-96897881 protein_coding
ENST00000478382 (NDUFAF4-002) 96891012-96896918 processed_transcript
ENST00000489477 (NDUFAF4-003) 96891151-96897874 processed_transcript
ENSG00000146263 (MMS22L)
MMS22-like, DNA repair protein 		ENST00000275053 (MMS22L-001) 97142161-97283176 protein_coding
ENST00000369251 (MMS22L-010) 97146545-97282553 protein_coding
ENST00000482634 (MMS22L-003) 97245979-97263352 protein_coding
ENST00000484170 (MMS22L-004) 97259663-97272795 processed_transcript
ENST00000496119 (MMS22L-002) 97267904-97283210 nonsense_mediated_decay
ENST00000506256 (MMS22L-011) 97259372-97272801 processed_transcript
ENST00000508820 (MMS22L-005) 97265720-97283217 retained_intron
ENST00000508976 (MMS22L-007) 97253465-97282511 retained_intron
ENST00000509383 (MMS22L-006) 97230269-97283188 nonsense_mediated_decay
ENST00000510018 (MMS22L-008) 97233861-97281304 protein_coding
ENST00000511335 (MMS22L-009) 97258663-97273105 retained_intron
ENST00000514790 (MMS22L-012) 97151578-97162045 retained_intron
ENSG00000186231 (KLHL32)
kelch-like family member 32 		ENST00000369254 (KLHL32-003) 96967009-97130942 protein_coding
ENST00000369261 (KLHL32-001) 96924729-97140754 protein_coding
ENST00000447886 (KLHL32-002) 97064628-97114179 protein_coding
ENST00000536676 (KLHL32-201) 96924620-97140754 protein_coding
ENST00000539200 (KLHL32-202) 96924620-97140754 protein_coding
ENST00000544166 (KLHL32-203) 96924620-97140754 protein_coding
ENST00000620278 (KLHL32-204) 97010199-97140754 protein_coding
ENSG00000226684 (RP3-418C23.2)
 ENST00000457513 (RP3-418C23.2-001) 97283303-97306098 lincRNA
ENST00000574739 (RP3-418C23.2-003) 97305586-97310048 lincRNA
CIL_00096U_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs676 VISTA 10090 4:24369206-24970330
GeneTranscriptPositionBiotype
ENSMUSG00000028261 (Ndufaf4)
NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 4 		ENSMUST00000029925 (Ndufaf4-001) 24898083-24905001 protein_coding
ENSMUST00000146721 (Ndufaf4-002) 24898131-24903505 processed_transcript
ENSMUST00000151249 (Ndufaf4-003) 24898176-24903485 protein_coding
ENSMUSG00000040372 (Gpr63)
G protein-coupled receptor 63 		ENSMUST00000038920 (Gpr63-001) 24973419-25009233 protein_coding
ENSMUST00000151006 (Gpr63-002) 24966407-25007300 processed_transcript
ENSMUSG00000040387 (Klhl32)
kelch-like 32 		ENSMUST00000084781 (Klhl32-201) 24617273-24851086 protein_coding
ENSMUST00000108213 (Klhl32-003) 24649302-24850931 retained_intron
ENSMUST00000108214 (Klhl32-005) 24612554-24800890 protein_coding
ENSMUST00000108218 (Klhl32-001) 24612554-24851124 protein_coding
ENSMUST00000140652 (Klhl32-002) 24616055-24850931 nonsense_mediated_decay
ENSMUST00000144062 (Klhl32-006) 24649844-24675427 processed_transcript
ENSMUST00000150920 (Klhl32-004) 24615966-24743965 nonsense_mediated_decay
ENSMUSG00000045751 (Mms22l)
MMS22-like, DNA repair protein 		ENSMUST00000050446 (Mms22l-008) 24496544-24602946 protein_coding
ENSMUST00000108222 (Mms22l-001) 24496451-24602950 protein_coding
ENSMUST00000123984 (Mms22l-010) 24578848-24591208 processed_transcript
ENSMUST00000131282 (Mms22l-003) 24507434-24599984 nonsense_mediated_decay
ENSMUST00000138567 (Mms22l-005) 24496462-24503413 protein_coding
ENSMUST00000139050 (Mms22l-004) 24496465-24497044 processed_transcript
ENSMUST00000154349 (Mms22l-002) 24505162-24602949 retained_intron
ENSMUST00000154496 (Mms22l-006) 24536348-24574795 protein_coding
ENSMUST00000172622 (Mms22l-009) 24497896-24529163 protein_coding
ENSMUST00000173079 (Mms22l-007) 24496451-24581338 retained_intron
ENSMUSG00000087399 (Gm11899)
predicted gene 11899 		ENSMUST00000142373 (Gm11899-001) 24792680-24800310 antisense
ENSMUSG00000099150 (Gm27243)
predicted gene 27243 		ENSMUST00000183964 (Gm27243-001) 24430370-24430890 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00096U_0001ENSG00000112218ENST00000229955ENSG00000123545ENST00000316149ENST00000478382ENST00000489477ENSG00000146263ENST00000275053ENST00000369251ENST00000482634ENST00000484170ENST00000496119ENST00000506256ENST00000508820ENST00000508976ENST00000509383ENST00000510018ENST00000511335ENST00000514790ENSG00000186231ENST00000369254ENST00000369261ENST00000447886ENST00000536676ENST00000539200ENST00000544166ENST00000620278ENSG00000226684ENST00000457513ENST00000574739CIL_00096U_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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00096U_0001ENSG00000112218ENST00000229955ENSG00000123545ENST00000316149ENST00000478382ENST00000489477ENSG00000146263ENST00000275053ENST00000369251ENST00000496119ENST00000506256ENST00000508820ENST00000509383ENST00000511335ENSG00000186231ENST00000369254ENST00000369261ENST00000447886ENST00000536676ENST00000539200ENST00000544166ENST00000620278ENSG00000226684ENST00000457513ENST00000574739CIL_00096U_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
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000112218 ENST00000229955 0.145±0.00 0.085±0.00 0.034±0.00 1.004±0.53 0.447±0.37 0.688±0.45 0.112±0.06 0.124±0.06 0.408±0.40 0.136±0.01 0.011±0.00 0.360±0.11 0.148±0.05 1.132±0.02
ENSG00000123545 ENST00000316149 0.978±0.00 1.738±0.00 0.409±0.00 10.189±0.24 1.560±1.13 2.078±1.01 4.725±2.27 3.031±2.69 1.842±0.74 0.590±0.00 1.912±1.28 2.146±1.37 0.944±0.40 3.476±0.43
ENST00000478382 4.659±0.00 7.227±0.00 1.012±0.00 N/A 3.256±2.44 3.279±2.17 6.409±0.00 9.149±8.04 8.834±0.00 5.133±0.00 8.587±0.00 5.950±3.81 6.585±1.60 6.290±0.00
ENST00000489477 2.189±0.00 3.201±0.00 N/A N/A N/A 2.834±0.00 9.487±0.00 0.291±0.00 3.749±0.00 2.163±0.00 0.604±0.00 2.048±0.93 1.700±0.06 4.506±0.00
ENSG00000146263 ENST00000275053 0.103±0.00 0.439±0.00 N/A 0.307±0.00 N/A 0.234±0.00 0.062±0.00 N/A 0.276±0.25 0.105±0.00 N/A 0.295±0.14 0.371±0.26 0.807±0.41
ENST00000369251 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.086±0.00 0.025±0.00 1.308±0.00 N/A 2.053±0.54
ENST00000482634 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484170 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496119 N/A N/A N/A N/A N/A N/A N/A 0.724±0.00 N/A N/A N/A N/A N/A N/A
ENST00000506256 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.134±0.00 N/A N/A N/A
ENST00000508820 N/A N/A N/A N/A 0.322±0.00 0.391±0.00 N/A 0.101±0.00 N/A N/A N/A 0.498±0.00 N/A N/A
ENST00000508976 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509383 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.571±0.00 N/A N/A N/A N/A
ENST00000510018 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511335 0.094±0.00 0.223±0.00 0.117±0.00 0.079±0.02 0.116±0.00 N/A 0.055±0.00 0.084±0.00 0.023±0.00 0.209±0.00 0.010±0.01 0.147±0.09 0.069±0.00 N/A
ENST00000514790 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000186231 ENST00000369254 N/A N/A 0.704±0.00 N/A N/A 0.189±0.00 N/A N/A 0.182±0.00 N/A 0.139±0.00 N/A 0.157±0.02 N/A
ENST00000369261 N/A N/A 0.181±0.00 5.427±3.32 N/A N/A 0.280±0.00 0.151±0.05 N/A 0.712±0.00 N/A 0.311±0.18 N/A 0.713±0.23
ENST00000447886 N/A N/A N/A N/A N/A N/A N/A N/A 0.172±0.00 N/A 0.087±0.00 N/A 0.058±0.01 0.717±0.00
ENST00000536676 N/A N/A N/A 0.951±0.00 N/A N/A N/A N/A 0.158±0.00 0.095±0.00 N/A N/A N/A N/A
ENST00000539200 0.020±0.00 0.069±0.00 N/A N/A N/A 0.029±0.00 N/A N/A N/A N/A N/A 0.028±0.00 N/A N/A
ENST00000544166 N/A N/A N/A N/A 0.059±0.00 0.084±0.00 0.133±0.00 N/A 0.021±0.00 N/A N/A 0.077±0.00 N/A N/A
ENST00000620278 N/A N/A N/A N/A 0.038±0.00 0.059±0.00 0.074±0.00 N/A N/A 0.545±0.00 N/A 0.094±0.00 N/A N/A
ENSG00000226684 ENST00000457513 N/A N/A N/A 0.218±0.00 N/A N/A 0.048±0.00 N/A N/A N/A N/A 0.124±0.00 N/A 0.167±0.00
ENST00000574739 N/A N/A N/A 0.621±0.44 N/A N/A N/A N/A N/A 0.061±0.00 N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000028261 ENSMUST00000029925 0.288±0.03 N/A 1.040±0.09 1.427±0.11 0.544±0.01 0.446±0.00 1.420±0.18 1.649±0.52 1.163±0.39 0.331±0.00 1.373±0.09 0.873±0.57 0.250±0.00 0.158±0.00
ENSMUST00000146721 1.837±0.54 4.605±1.39 4.332±0.74 3.733±0.76 1.981±0.47 1.858±0.49 3.981±0.31 1.918±0.25 2.828±1.44 1.636±0.59 8.426±0.87 2.473±1.44 2.381±1.18 0.475±0.03
ENSMUST00000151249 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.828±0.00 N/A 5.547±2.79 N/A
ENSMUSG00000040372 ENSMUST00000038920 N/A 1.868±0.00 N/A N/A 0.701±0.08 N/A N/A N/A N/A N/A N/A 1.172±0.00 N/A N/A
ENSMUST00000151006 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000040387 ENSMUST00000084781 1.065±1.02 2.135±0.58 0.784±0.00 1.834±0.31 0.097±0.06 1.194±0.16 0.678±0.13 0.779±0.21 0.026±0.00 0.426±0.10 0.015±0.00 1.267±0.63 0.075±0.00 1.531±0.53
ENSMUST00000108213 0.046±0.00 N/A N/A N/A 0.053±0.00 N/A 0.271±0.07 0.216±0.04 0.046±0.01 N/A N/A 0.501±0.22 0.049±0.00 N/A
ENSMUST00000108214 0.024±0.00 N/A N/A 0.329±0.00 0.027±0.01 N/A N/A N/A 0.020±0.01 N/A 0.013±0.01 0.073±0.00 0.016±0.01 N/A
ENSMUST00000108218 0.448±0.31 0.294±0.03 0.375±0.00 1.447±0.35 0.017±0.00 0.195±0.08 0.193±0.03 0.127±0.04 N/A 0.120±0.06 N/A 0.195±0.12 0.052±0.00 N/A
ENSMUST00000140652 N/A N/A N/A N/A N/A N/A N/A N/A 0.022±0.00 N/A 0.018±0.01 N/A N/A 0.386±0.00
ENSMUST00000144062 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.081±0.00 N/A
ENSMUST00000150920 N/A N/A N/A N/A 0.009±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000045751 ENSMUST00000050446 0.121±0.00 N/A N/A N/A 0.422±0.12 N/A N/A N/A 0.565±0.00 N/A 0.014±0.00 0.917±0.39 0.408±0.00 0.564±0.06
ENSMUST00000108222 0.674±0.28 0.356±0.00 0.551±0.23 1.816±0.17 0.570±0.12 0.960±0.18 0.088±0.02 0.348±0.05 4.629±3.33 0.758±0.00 N/A 1.537±0.63 3.540±1.75 1.160±0.60
ENSMUST00000123984 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.057±0.00 N/A N/A 3.460±0.00
ENSMUST00000131282 N/A N/A N/A N/A 0.276±0.00 N/A N/A N/A N/A N/A 0.014±0.00 N/A N/A N/A
ENSMUST00000138567 0.988±0.12 1.295±0.33 0.785±0.21 2.679±2.03 1.309±0.24 1.385±0.68 0.100±0.02 0.277±0.08 3.363±3.38 0.581±0.11 0.071±0.02 1.302±0.27 2.482±1.68 1.594±0.24
ENSMUST00000139050 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154349 0.344±0.00 N/A 0.224±0.00 1.324±0.04 0.373±0.17 0.598±0.00 0.081±0.07 N/A 1.655±0.71 N/A 0.024±0.01 0.631±0.00 0.874±0.09 0.801±0.00
ENSMUST00000154496 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.088±0.00 N/A N/A N/A
ENSMUST00000172622 N/A N/A N/A 0.155±0.00 N/A N/A N/A N/A N/A N/A 0.036±0.03 N/A N/A N/A
ENSMUST00000173079 N/A N/A N/A 0.079±0.00 N/A N/A N/A N/A N/A N/A 0.031±0.00 N/A N/A N/A
ENSMUSG00000087399 ENSMUST00000142373 N/A N/A N/A N/A N/A N/A 1.426±0.28 N/A N/A 0.464±0.00 N/A 1.038±0.00 N/A 1.081±0.00
ENSMUSG00000099150 ENSMUST00000183964 N/A N/A N/A 2.272±1.51 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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