C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: angiopoietin-like 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000030280 Angptl3-001 ENSMUSG00000028553 10090 + 4:99030954-99038065 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000030280
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000030280 0.092±0.04 0.448±0.00 0.038±0.00 0.089±0.00 0.197±0.03 0.090±0.00 0.053±0.00 2.551±0.41 80.501±51.51 0.078±0.00 0.049±0.03 0.280±0.22 0.750±0.67 0.015±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002G2 CIL_0002G2_0002 CGP 4:98923810-99120915
CIL_000051 CIL_000051_0003 CGP 4:98936665-99120915
CIL_0008H9 CIL_0008H9_0002 VISTA 4:98994411-99595982
CIL_0002G5 CIL_0002G5_0002 CGP 4:99030954-99259787

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004857 IDA enzyme inhibitor activity
GO:0004859 IEA phospholipase inhibitor activity
GO:0005178 ISS integrin binding
GO:0005576 ISS extracellular region
GO:0005615 IEA extracellular space
GO:0006071 IEA glycerol metabolic process
GO:0006631 IEA fatty acid metabolic process
GO:0006641 NAS triglyceride metabolic process
GO:0006644 IEA phospholipid metabolic process
GO:0007160 ISS cell-matrix adhesion
GO:0007165 IEA signal transduction
GO:0008083 IEA growth factor activity
GO:0008203 IEA cholesterol metabolic process
GO:0009395 IEA phospholipid catabolic process
GO:0009986 IEA cell surface
GO:0010519 IMP negative regulation of phospholipase activity
GO:0019915 IEA lipid storage
GO:0030335 ISS positive regulation of cell migration
GO:0042632 IMP cholesterol homeostasis
GO:0045766 ISS positive regulation of angiogenesis
GO:0045834 NAS positive regulation of lipid metabolic process
GO:0048844 IMP artery morphogenesis
GO:0050996 IEA positive regulation of lipid catabolic process
GO:0051005 IEA negative regulation of lipoprotein lipase activity
GO:0055088 IEA lipid homeostasis
GO:0055090 IMP acylglycerol homeostasis
GO:0055091 IMP phospholipid homeostasis
GO:0070328 IMP triglyceride homeostasis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000371129 ANGPTL3-001 protein_coding Homo_sapiens 0 1092
ENST00000493994 ANGPTL3-003 processed_transcript Homo_sapiens 0 233

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