C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: oxysterol binding protein-like 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000030288 Osbpl9-001 ENSMUSG00000028559 10090 - 4:109061655-109202272 protein_coding

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderHeartKidneyLiverLungOvaryPlacentaENSMUST00000030288
Transcript ID Adipose Bladder Heart Kidney Liver Lung Ovary Placenta
ENSMUST00000030288 17.029±3.41 26.340±0.00 8.175±0.00 11.235±0.00 8.218±0.87 21.894±7.54 24.457±0.63 20.435±3.50

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001W2 CIL_0001W2_0002 CGP 4:108879063-109061777

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005768 IEA endosome
GO:0005794 IEA Golgi apparatus
GO:0006869 IEA lipid transport
GO:0008289 IEA lipid binding
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000361556 OSBPL9-006 protein_coding Homo_sapiens 0 2416
ENST00000371707 OSBPL9P4-001 processed_pseudogene Homo_sapiens 0 1363
ENST00000371714 OSBPL9-004 protein_coding Homo_sapiens 0 2416
ENST00000428468 OSBPL9-001 protein_coding Homo_sapiens 0 3282
ENST00000435274 OSBPL9-015 nonsense_mediated_decay Homo_sapiens 0 2324
ENST00000447887 OSBPL9-002 protein_coding Homo_sapiens 0 2416
ENST00000453295 OSBPL9-005 protein_coding Homo_sapiens 0 3013
ENST00000462759 OSBPL9-007 protein_coding Homo_sapiens 0 2416
ENST00000467064 OSBPL9-012 retained_intron Homo_sapiens 0 228
ENST00000473207 OSBPL9-022 processed_transcript Homo_sapiens 0 375
ENST00000475697 OSBPL9-014 retained_intron Homo_sapiens 0 2414
ENST00000481937 OSBPL9-011 protein_coding Homo_sapiens 0 233
ENST00000484890 OSBPL9-013 retained_intron Homo_sapiens 0 477
ENST00000486942 OSBPL9-008 protein_coding Homo_sapiens 0 2416
ENST00000489990 OSBPL9-009 nonsense_mediated_decay Homo_sapiens 0 800
ENST00000495776 OSBPL9-003 nonsense_mediated_decay Homo_sapiens 0 2891
ENST00000524620 OSBPL9-023 processed_transcript Homo_sapiens 0 300
ENST00000526582 OSBPL9P2-001 processed_pseudogene Homo_sapiens 0 1099
ENST00000526917 OSBPL9-021 nonsense_mediated_decay Homo_sapiens 0 329
ENST00000527631 OSBPL9-019 protein_coding Homo_sapiens 0 654
ENST00000528603 OSBPL9-024 nonsense_mediated_decay Homo_sapiens 0 929
ENST00000531061 OSBPL9-025 nonsense_mediated_decay Homo_sapiens 0 490
ENST00000531819 OSBPL9-016 retained_intron Homo_sapiens 0 627
ENST00000531828 OSBPL9-010 protein_coding Homo_sapiens 0 2593
ENST00000532975 OSBPL9-017 protein_coding Homo_sapiens 0 398
ENST00000533825 OSBPL9-026 processed_transcript Homo_sapiens 0 614
ENST00000533884 OSBPL9-020 nonsense_mediated_decay Homo_sapiens 0 261
ENST00000534040 OSBPL9-018 nonsense_mediated_decay Homo_sapiens 0 311
ENST00000534523 OSBPL9P3-001 processed_pseudogene Homo_sapiens 0 652
ENST00000604744 OSBPL9P1-001 processed_pseudogene Homo_sapiens 0 902
ENST00000625138 OSBPL9-027 protein_coding Homo_sapiens 0 556

Loading