C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: oxysterol binding protein-like 9 pseudogene 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000371707 OSBPL9P4-001 ENSG00000256420 9606 - 12:66563967-66569194 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonOvaryPlacentaTestisENST00000371707
Transcript ID Adipose Brain Breast Colon Ovary Placenta Testis
ENST00000371707 0.006±0.00 0.075±0.00 0.043±0.00 0.154±0.00 0.010±0.00 0.070±0.00 0.059±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002KS CIL_0002KS_0002 CGP 12:66347431-67319951
CIL_0008D5 CIL_0008D5_0001 VISTA 12:66433324-67035950

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000030288 Osbpl9-001 protein_coding Mus_musculus 0 1363
ENSMUST00000159545 Osbpl9-011 nonsense_mediated_decay Mus_musculus 0 1363
ENSMUST00000160774 Osbpl9-012 protein_coding Mus_musculus 0 1363
ENSMUST00000084366 Osbpl9-003 protein_coding Mus_musculus 0 1363
ENSMUST00000161363 Osbpl9-013 protein_coding Mus_musculus 0 1142
ENSMUST00000162787 Osbpl9-010 protein_coding Mus_musculus 0 1142
ENSMUST00000160271 Osbpl9-014 protein_coding Mus_musculus 0 1142
ENSMUST00000152167 Osbpl9-006 processed_transcript Mus_musculus 0 566
ENSMUST00000153714 Osbpl9-007 processed_transcript Mus_musculus 0 331
ENSMUST00000177308 Gm18588-001 processed_pseudogene Mus_musculus 0 250
ENSMUST00000161602 Osbpl9-017 retained_intron Mus_musculus 0 222
ENSMUST00000160895 Osbpl9-015 retained_intron Mus_musculus 3e-25 121
ENSMUST00000159198 Osbpl9-018 processed_transcript Mus_musculus 2e-21 108

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