C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0001W2_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000042803-ENSDARG00000062372 CGP 7955 22:17425724-17458056
GeneTranscriptPositionBiotype
ENSDARG00000062372 (nrd1)
nardilysin (N-arginine dibasic convertase)
ENSDART00000090107 (nrd1-001) 17436402-17458056 protein_coding
ENSDART00000129109 (nrd1-201) 17436375-17458001 protein_coding
CIL_0001W2_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000003411-ENSMUSG00000053510 CGP 10090 4:108879063-109061777
GeneTranscriptPositionBiotype
ENSMUSG00000003411 (Rab3b)
RAB3B, member RAS oncogene family
ENSMUST00000003502 (Rab3b-003) 108890290-108941188 protein_coding
ENSMUST00000106650 (Rab3b-001) 108879063-108943324 protein_coding
ENSMUST00000106651 (Rab3b-002) 108879200-108941185 protein_coding
ENSMUST00000157062 (Rab3b-004) 108939100-108940905 processed_transcript
ENSMUSG00000028559 (Osbpl9)
oxysterol binding protein-like 9
ENSMUST00000030288 (Osbpl9-001) 109061655-109202272 protein_coding
ENSMUST00000084366 (Osbpl9-003) 109061145-109118022 protein_coding
ENSMUST00000126288 (Osbpl9-002) 109068363-109117698 processed_transcript
ENSMUST00000139248 (Osbpl9-005) 109087447-109157125 processed_transcript
ENSMUST00000139412 (Osbpl9-008) 109068009-109072084 processed_transcript
ENSMUST00000147457 (Osbpl9-004) 109133777-109202236 processed_transcript
ENSMUST00000152167 (Osbpl9-006) 109083089-109109765 processed_transcript
ENSMUST00000153714 (Osbpl9-007) 109087410-109108031 processed_transcript
ENSMUST00000155434 (Osbpl9-009) 109064438-109065990 processed_transcript
ENSMUST00000159198 (Osbpl9-018) 109061974-109087449 processed_transcript
ENSMUST00000159545 (Osbpl9-011) 109061655-109202234 nonsense_mediated_decay
ENSMUST00000159758 (Osbpl9-016) 109171802-109202234 retained_intron
ENSMUST00000160271 (Osbpl9-014) 109061650-109118036 protein_coding
ENSMUST00000160774 (Osbpl9-012) 109061655-109202217 protein_coding
ENSMUST00000160895 (Osbpl9-015) 109086402-109088779 retained_intron
ENSMUST00000161363 (Osbpl9-013) 109062087-109156610 protein_coding
ENSMUST00000161602 (Osbpl9-017) 109083213-109156796 retained_intron
ENSMUST00000162787 (Osbpl9-010) 109062079-109202272 protein_coding
ENSMUSG00000053510 (Nrd1)
nardilysin, N-arginine dibasic convertase, NRD convertase 1
ENSMUST00000065977 (Nrd1-001) 109000655-109061777 protein_coding
ENSMUST00000102736 (Nrd1-008) 109000655-109061777 protein_coding
ENSMUST00000106644 (Nrd1-002) 109000770-109061161 protein_coding
ENSMUST00000125063 (Nrd1-006) 109058991-109060680 retained_intron
ENSMUST00000125645 (Nrd1-009) 109016775-109044666 protein_coding
ENSMUST00000143015 (Nrd1-005) 109054949-109056871 retained_intron
ENSMUST00000143604 (Nrd1-011) 109039757-109044128 retained_intron
ENSMUST00000148444 (Nrd1-004) 109046310-109050900 processed_transcript
ENSMUST00000150177 (Nrd1-010) 109032413-109043427 retained_intron
ENSMUST00000150784 (Nrd1-007) 109040202-109061475 processed_transcript
ENSMUST00000150796 (Nrd1-012) 109058934-109059800 retained_intron
ENSMUST00000155228 (Nrd1-003) 109024206-109032718 retained_intron
ENSMUSG00000082699 (Gm12736)
predicted gene 12736
ENSMUST00000119330 (Gm12736-001) 108933573-108933808 processed_pseudogene
ENSMUSG00000086483 (8030443G20Rik)
RIKEN cDNA 8030443G20 gene
ENSMUST00000140919 (8030443G20Rik-001) 108942843-108972077 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001W2_0001ENSDARG00000062372ENSDART00000090107ENSDART00000129109CIL_0001W2_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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001W2_0001ENSDARG00000062372ENSDART00000090107ENSDART00000129109CIL_0001W2_0002ENSMUSG00000003411ENSMUST00000003502ENSMUST00000106650ENSMUST00000106651ENSMUST00000157062ENSMUSG00000028559ENSMUST00000030288ENSMUST00000152167ENSMUST00000160271ENSMUST00000162787ENSMUSG00000053510ENSMUST00000065977ENSMUST00000102736ENSMUST00000106644ENSMUST00000125063ENSMUST00000150784ENSMUSG00000082699ENSMUST00000119330ENSMUSG00000086483ENSMUST00000140919
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000062372 ENSDART00000090107 N/A N/A N/A 1.326±0.00 N/A N/A 1.676±0.02 0.837±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000129109 N/A N/A N/A 1.065±0.00 N/A N/A 1.402±0.08 0.064±0.00 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000003411 ENSMUST00000003502 0.504±0.29 20.720±8.37 1.199±0.11 19.031±9.02 0.380±0.17 17.798±2.62 1.636±0.24 6.458±0.72 0.592±0.35 0.725±0.20 0.131±0.07 1.194±0.82 1.765±1.03 2.324±1.08
ENSMUST00000106650 0.096±0.06 4.844±1.27 0.210±0.06 2.928±0.57 0.046±0.01 2.689±0.51 0.589±0.07 2.377±0.35 0.162±0.10 0.080±0.03 0.013±0.00 0.192±0.14 0.155±0.10 0.784±0.38
ENSMUST00000106651 0.195±0.00 11.152±1.37 N/A N/A 0.277±0.00 N/A 0.413±0.00 N/A N/A 0.167±0.01 N/A 0.801±0.46 0.524±0.00 N/A
ENSMUST00000157062 N/A N/A N/A N/A N/A N/A N/A N/A 0.452±0.08 N/A 0.197±0.07 1.297±0.84 N/A N/A
ENSMUSG00000028559 ENSMUST00000030288 17.029±3.41 N/A 26.340±0.00 N/A N/A N/A 8.175±0.00 11.235±0.00 8.218±0.87 21.894±7.54 N/A 24.457±0.63 20.435±3.50 N/A
ENSMUST00000084366 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000126288 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139248 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139412 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147457 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152167 N/A 73.871±9.05 N/A N/A 88.509±22.33 39.273±8.77 N/A 74.839±18.21 71.717±12.76 78.275±5.62 N/A 61.576±15.57 N/A N/A
ENSMUST00000153714 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155434 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000159198 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000159545 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000159758 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000160271 N/A 11.431±2.82 12.896±0.00 11.912±0.00 10.892±1.27 5.318±0.00 12.208±2.09 22.225±4.25 18.345±2.07 12.860±1.29 21.430±2.81 20.876±2.01 14.608±0.00 N/A
ENSMUST00000160774 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000160895 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000161363 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000161602 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162787 14.636±1.18 7.226±0.10 N/A 21.649±4.43 18.534±2.89 10.533±2.75 13.327±3.39 18.821±3.83 8.400±1.04 26.029±6.26 N/A 22.030±2.72 17.415±0.00 N/A
ENSMUSG00000053510 ENSMUST00000065977 10.160±1.91 5.826±0.92 14.748±0.64 18.141±4.31 8.887±0.92 6.983±1.86 10.722±2.34 11.144±2.24 10.246±5.85 16.897±3.33 15.290±6.46 17.888±1.05 12.740±3.08 76.039±29.86
ENSMUST00000102736 N/A 5.105±0.00 N/A 16.295±0.00 N/A 3.211±0.00 N/A N/A N/A N/A N/A 11.329±1.77 9.805±0.00 N/A
ENSMUST00000106644 11.438±1.44 4.547±0.00 17.876±0.31 27.311±6.60 11.717±3.87 6.338±0.00 16.426±1.43 10.159±2.81 13.281±6.00 N/A 25.943±3.58 19.161±17.29 16.442±5.62 132.007±77.25
ENSMUST00000125063 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 46.307±0.00 N/A
ENSMUST00000125645 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143015 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143604 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148444 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150177 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150784 N/A N/A N/A N/A N/A 6.632±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150796 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155228 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000082699 ENSMUST00000119330 N/A N/A N/A N/A N/A N/A N/A N/A 0.559±0.16 0.745±0.00 N/A N/A 0.090±0.00 1.255±0.00
ENSMUSG00000086483 ENSMUST00000140919 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.044±0.00 N/A N/A N/A

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